RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ZPLD1Q8TCW7 415 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 PHF10Q8WUB8 498 aaKnown RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 SLC25A43Q8WUT9 341 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 DNAJA4Q8WW22 397 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 GEMIN6Q8WXD5 167 aaKnown RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 TUBA1CQ9BQE3 449 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 FAM215AQ9Y5M1 114 aa10.61□□□□□ -0.71
CPNE1-221ENST00000462352 SPIN1Q9Y657 262 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 UBR5O95071 2799 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-221ENST00000462352 CLCA1A8K7I4 914 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 E9PLN8 166 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 CCL21O00585 134 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 ACOT8O14734 319 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 TNFSF11O14788 317 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 ADAMDEC1O15204 470 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 LRRTM2O43300 516 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 ZNF208O43345 1280 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 SEMA7AO75326 666 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 IFNW1P05000 195 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 HOXD4P09016 255 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-221ENST00000462352 FKBP2P26885 142 aaKnown RBP10.6□□□□□ -0.71
CPNE1-221ENST00000462352 MAP2K6P52564 334 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 RPS3AP61247 264 aaKnown RBP10.6□□□□□ -0.71
CPNE1-221ENST00000462352 KCNC4Q03721 635 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 GABPB1Q06547 395 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-221ENST00000462352 TRAP1Q12931 704 aaKnown RBP10.6□□□□□ -0.71
CPNE1-221ENST00000462352 SF3B4Q15427 424 aaKnown RBP eCLIP10.6□□□□□ -0.718e-19■■■■■ 38.5
CPNE1-221ENST00000462352 C4orf17Q53FE4 359 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 SYT14P1Q58G82 188 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 ALG10BQ5I7T1 473 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 C1orf185Q5T7R7 199 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 HBMQ6B0K9 141 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 ZNF613Q6PF04 617 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 CHMP1BQ7LBR1 199 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 ADGRE4PQ86SQ3 457 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 FJX1Q86VR8 437 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 OR10D3Q8NH80 312 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 OR2V1Q8NHB1 315 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 ADAMTS16Q8TE57 1224 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 SLC47A1Q96FL8 570 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 PYURFQ96I23 114 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 VKORC1Q9BQB6 163 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 AMBRA1Q9C0C7 1298 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 OR11A1Q9GZK7 315 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 COQ10BQ9H8M1 238 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 C12orf10Q9HB07 376 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 MEMO1Q9Y316 297 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 V9GYQ6 96 aa10.6□□□□□ -0.71
CPNE1-221ENST00000462352 A0A1B0GUH1 482 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 A0A1W2PNR3 127 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 TCRBV5S2A0A599 114 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 ZC3H12DA2A288 527 aaKnown RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 TRAPPC13A5PLN9 417 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 ELOA3DA6NLF2 546 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 KDM4EB2RXH2 506 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 CXCL13O43927 109 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 STAMBPO95630 424 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 THY1P04216 161 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 TFPIP10646 304 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 PNMTP11086 282 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 SLC7A1P30825 629 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 EIF1AXP47813 144 aaKnown RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 CLK1P49759 484 aaKnown RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 CDH12P55289 794 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 SGCBQ16585 318 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 ELOA3BQ3SY89 546 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 MTX3Q5HYI7 312 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 PDSS1Q5T2R2 415 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 SWT1Q5T5J6 900 aaKnown RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 NSUN5P2Q63ZY6 315 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 PLXDC2Q6UX71 529 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 RPTNQ6XPR3 784 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 B3GNT6Q6ZMB0 384 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 NCCRP1Q6ZVX7 275 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 ASRGL1Q7L266 308 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 MARVELD2Q8N4S9 558 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 ELOA3Q8NG57 546 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 RNF217Q8TC41 542 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 OSTF1Q92882 214 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 SLC38A4Q969I6 547 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 DDIT4LQ96D03 193 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 SLC41A3Q96GZ6 507 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 ZNF845Q96IR2 970 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 ARL5BQ96KC2 179 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 OR5B2Q96R09 309 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 TRIB1Q96RU8 372 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 DMRTA2Q96SC8 542 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 TTYH2Q9BSA4 534 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 POLR2J2Q9GZM3 115 aaKnown RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 POLR2J3Q9H1A7 115 aaKnown RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 MMADHCQ9H3L0 296 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 CALHM2Q9HA72 323 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 PAQR5Q9NXK6 330 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-221ENST00000462352 SELENONQ9NZV5 590 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 SLC7A8Q9UHI5 535 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 SLC7A7Q9UM01 511 aa10.59□□□□□ -0.71
CPNE1-221ENST00000462352 HELZ2Q9BYK8 2649 aaKnown RBP10.58□□□□□ -0.72
CPNE1-221ENST00000462352 FLNCQ14315 2725 aa10.58□□□□□ -0.72
CPNE1-221ENST00000462352 A0A087WUJ7 227 aa10.58□□□□□ -0.72
CPNE1-221ENST00000462352 CD8B2A6NJW9 211 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms