RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 HMGN1P05114 100 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 ADRA2AP08913 450 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 RAB3AP20336 220 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 INSL4Q14641 139 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 OR1Q1Q15612 314 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 DEFB133Q30KQ1 61 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF770Q6IQ21 691 aaPredicted RBP14.27□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF836Q6ZNA1 936 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 ATCAYQ86WG3 371 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 KLHL36Q8N4N3 616 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 OR13C2Q8NGS9 318 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 TMEM163Q8TC26 289 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 KLHL15Q96M94 604 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 MAP3K3Q99759 626 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 POLDIP3Q9BY77 421 aaKnown RBP14.27□□□□□ -0.13
LMNB1-203ENST00000460265 CYB5R1Q9UHQ9 305 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 KCND3Q9UK17 655 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 GTF2A1LQ9UNN4 478 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 RTTNQ86VV8 2226 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 FAM171A2A8MVW0 826 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 PRR23D1E9PI22 279 aaPredicted RBP14.27□□□□□ -0.13
LMNB1-203ENST00000460265 SCG5P05408 212 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 PRR23D2P0DMB1 279 aaPredicted RBP14.27□□□□□ -0.13
LMNB1-203ENST00000460265 POLR2GP62487 172 aaKnown RBP eCLIP14.27□□□□□ -0.13
LMNB1-203ENST00000460265 HSD17B12Q53GQ0 312 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 BCL2L15Q5TBC7 163 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 OR4N2Q8NGD1 307 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 OR8D4Q8NGM9 314 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 SLC22A8Q8TCC7 542 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 TMEM239Q8WW34 195 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 SPACA7Q96KW9 195 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 WDFY2Q96P53 400 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 FAM60AQ9NP50 221 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 HPF1Q9NWY4 346 aa14.27□□□□□ -0.13
LMNB1-203ENST00000460265 TRAV6A0A075B6T7 132 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 TRAPPC13A5PLN9 417 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 UNC119BA6NIH7 251 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 PRSS44E7EML9 344 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 PRAMEF26H0Y7S4 382 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 BLOC1S5-TXNDC5H3BN57 136 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 PSMD9O00233 223 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 TOXO94900 526 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 HRGP04196 525 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 CTSBP07858 339 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 ACSM4P0C7M7 580 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 GABRB1P18505 474 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 NAA10P41227 235 aaPredicted RBP14.26□□□□□ -0.13
LMNB1-203ENST00000460265 BLKP51451 505 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 SNRPGP62308 76 aaKnown RBP14.26□□□□□ -0.13
LMNB1-203ENST00000460265 NDUFAF6Q330K2 333 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 MRM1Q6IN84 353 aaKnown RBP14.26□□□□□ -0.13
LMNB1-203ENST00000460265 C1orf94Q6P1W5 598 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 OR4K13Q8NH42 304 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 NEIL3Q8TAT5 605 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 SPRYD4Q8WW59 207 aaPredicted RBP14.26□□□□□ -0.13
LMNB1-203ENST00000460265 CNOT9Q92600 299 aaKnown RBP14.26□□□□□ -0.13
LMNB1-203ENST00000460265 SLC6A18Q96N87 628 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 DGAT2Q96PD7 388 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 BCL2L10Q9HD36 194 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 DHFRP00374 187 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 CLDN20P56880 219 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 FRRS1Q6ZNA5 592 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 RTL4Q6ZR62 310 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 C17orf107Q6ZR85 190 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 TRILQ7L0X0 811 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 MCATQ8IVS2 390 aaKnown RBP14.26□□□□□ -0.13
LMNB1-203ENST00000460265 CDRT4Q8N9R6 151 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 TMEM52Q8NDY8 209 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 MIXL1Q9H2W2 232 aa14.26□□□□□ -0.13
LMNB1-203ENST00000460265 A0A0J9YY10 115 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 LINC01387J3KSC0 135 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 ACP2P11117 423 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 CD79BP40259 229 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 RABIFP47224 123 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 LSSP48449 732 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 ALG10BQ5I7T1 473 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 ASB18Q6ZVZ8 466 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 SLC44A3Q8N4M1 653 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 ZNF576Q9H609 170 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 MAN2C1Q9NTJ4 1040 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 TXNL4BQ9NX01 149 aaKnown RBP14.25□□□□□ -0.13
LMNB1-203ENST00000460265 AUP1Q9Y679 476 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 FKBP7Q9Y680 259 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 HELZP42694 1942 aaKnown RBP14.25□□□□□ -0.13
LMNB1-203ENST00000460265 PPP1R3DO95685 299 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 ANXA3P12429 323 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 TEAD1P28347 426 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 GRPRP30550 384 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 ADAM15Q13444 863 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 LRFN4Q6PJG9 635 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 NANOGP1Q8N7R0 232 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 BPIFA2Q96DR5 249 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 ERMAPQ96PL5 475 aaPredicted RBP14.25□□□□□ -0.13
LMNB1-203ENST00000460265 PRTFDC1Q9NRG1 225 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 ERVK-19Q9WJR5 959 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 PRELID3BQ9Y3B1 194 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 CDC14CA4D256 554 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 LRRN3E7EW58 273 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 TEX46H3BTG2 121 aa14.25□□□□□ -0.13
LMNB1-203ENST00000460265 KHNYNO15037 678 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms