RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 C3orf49Q96BT1 292 aa12.58□□□□□ -0.4
UPF3AP2-201ENST00000457924 MSI2Q96DH6 328 aaKnown RBP12.58□□□□□ -0.4
UPF3AP2-201ENST00000457924 MUS81Q96NY9 551 aa12.58□□□□□ -0.4
UPF3AP2-201ENST00000457924 TRMOQ9BU70 441 aa12.58□□□□□ -0.4
UPF3AP2-201ENST00000457924 EML4Q9HC35 981 aaKnown RBP12.58□□□□□ -0.4
UPF3AP2-201ENST00000457924 EMCNQ9ULC0 261 aa12.58□□□□□ -0.4
UPF3AP2-201ENST00000457924 KCNE3Q9Y6H6 103 aa12.58□□□□□ -0.4
UPF3AP2-201ENST00000457924 ARFGEF3Q5TH69 2177 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 NUP214P35658 2090 aaPredicted RBP12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 KIAA0513O60268 411 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 GLRA3O75311 464 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 TGFAP01135 160 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 TFPIP10646 304 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 RPL3P39023 403 aaKnown RBP12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 NR4A2P43354 598 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 SESN3P58005 492 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 DNAJB13P59910 316 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 MERTKQ12866 999 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 CARTPTQ16568 116 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 GALNTL6Q49A17 601 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 IQCCQ4KMZ1 466 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 PDZK1Q5T2W1 519 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 C1orf229Q6ZS94 237 aaPredicted RBP12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 PIGXQ8TBF5 258 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 SLC25A43Q8WUT9 341 aaPredicted RBP12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 LAT2Q9GZY6 243 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 MALT1Q9UDY8 824 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 ATP6V1HQ9UI12 483 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 FIS1Q9Y3D6 152 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 TRAF6Q9Y4K3 522 aa12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 SPIN1Q9Y657 262 aaPredicted RBP12.57□□□□□ -0.4
UPF3AP2-201ENST00000457924 SVEP1Q4LDE5 3571 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 SERINC4A6NH21 518 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 ZNF716A6NP11 495 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 AZIN1O14977 448 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 LSM1O15116 133 aaKnown RBP12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 SCAMP2O15127 329 aaKnown RBP12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 CHEK2O96017 543 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 ITGA5P08648 1049 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 LINC00032P0C843 101 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 BCKDHAP12694 445 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 PGCP20142 388 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 RUNX1T1Q06455 604 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 SKP2Q13309 424 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 RNF165Q6ZSG1 346 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 CNPY4Q8N129 248 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 C17orf78Q8N4C9 275 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 CCDC63Q8NA47 563 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 OR7A2PQ8NGA2 310 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 OR5P2Q8WZ92 322 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 FBXO17Q96EF6 278 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 SDF2Q99470 211 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 NMUR2Q9GZQ4 415 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 MYOZ1Q9NP98 299 aaPredicted RBP12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 GPATCH2Q9NW75 528 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 PSMC3IPQ9P2W1 217 aaPredicted RBP12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 UPB1Q9UBR1 384 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 TBK1Q9UHD2 729 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 AMDHD2Q9Y303 409 aa12.56□□□□□ -0.4
UPF3AP2-201ENST00000457924 IGHV4-61A0A0C4DH41 118 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 LOC390937A0A1W2PQ73 354 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 TMEM114B3SHH9 223 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 ATP6V1G2-DDX39BF2Z307 99 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 TCF21O43680 179 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 DNAJA2O60884 412 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 CSTAP01040 98 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 PROCP04070 461 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 LAMP1P11279 417 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 APOBEC1P41238 236 aaKnown RBP12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 MAGEA8P43361 318 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 FOXG1P55316 489 aaPredicted RBP12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 SNRPD2P62316 118 aaKnown RBP12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 GPR68Q15743 365 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 LSM12Q3MHD2 195 aaKnown RBP12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 CCDC153Q494R4 210 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 C1QTNF12Q5T7M4 302 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 C9orf135Q5VTT2 229 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 LIPMQ5VYY2 423 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 SVOPQ8N4V2 548 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 RFLNBQ8N5W9 214 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 NATD1Q8N6N6 113 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 GOLGA6L1Q8N7Z2 621 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 WDR31Q8NA23 367 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 ZNF540Q8NDQ6 660 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 C1orf162Q8NEQ5 155 aaPredicted RBP12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 OR52E4Q8NGH9 312 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 PSMA8Q8TAA3 256 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 ANP32BQ92688 251 aaKnown RBP12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 MOAP1Q96BY2 351 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 FOXN4Q96NZ1 517 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 SORCS2Q96PQ0 1159 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 OR7D2Q96RA2 312 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 TUBB1Q9H4B7 451 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 SLC17A5Q9NRA2 495 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 ACER3Q9NUN7 267 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 ATAD3AQ9NVI7 634 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 OXSMQ9NWU1 459 aa12.55□□□□□ -0.4
UPF3AP2-201ENST00000457924 ANKRD28O15084 1053 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 DNPH1O43598 174 aa12.54□□□□□ -0.4
UPF3AP2-201ENST00000457924 PMS2P2O95744 297 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms