RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 TRIM2Q9C040 744 aa7.92□□□□□ -1.14
RIF1-208ENST00000457745 POLR2J3Q9H1A7 115 aaKnown RBP7.92□□□□□ -1.14
RIF1-208ENST00000457745 VCXQ9H320 206 aa7.92□□□□□ -1.14
RIF1-208ENST00000457745 ANKRD19PQ9H560 264 aa7.92□□□□□ -1.14
RIF1-208ENST00000457745 TMEM27Q9HBJ8 222 aa7.92□□□□□ -1.14
RIF1-208ENST00000457745 C8orf4Q9NR00 106 aa7.92□□□□□ -1.14
RIF1-208ENST00000457745 KLRF1Q9NZS2 232 aa7.92□□□□□ -1.14
RIF1-208ENST00000457745 VDAC3Q9Y277 283 aa7.92□□□□□ -1.14
RIF1-208ENST00000457745 YARS2Q9Y2Z4 477 aaKnown RBP7.92□□□□□ -1.14
RIF1-208ENST00000457745 APC2O95996 2303 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 TRIM64A6NGJ6 449 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 UNC119BA6NIH7 251 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 H3BNH8 94 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 K7EM74 188 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 PRKYO43930 277 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 NPIPB7O75200 414 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 PTP4A3O75365 173 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 WDPCPO95876 746 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 CH25HO95992 272 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 BGLAPP02818 100 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 HPGDP15428 266 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 FPR3P25089 353 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 ITGA3P26006 1051 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 ITPKBP27987 946 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 RFC3P40938 356 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 CD97P48960 835 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 P2RX1P51575 399 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 CHN2P52757 468 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 NUDT6P53370 316 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 RAD23AP54725 363 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 CTBP2P56545 445 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 SMIM11AP58511 58 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 CDK5Q00535 292 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 ALDH6A1Q02252 535 aaKnown RBP7.91□□□□□ -1.14
RIF1-208ENST00000457745 MVKQ03426 396 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 CRYZQ08257 329 aaKnown RBP7.91□□□□□ -1.14
RIF1-208ENST00000457745 CDC20Q12834 499 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 TSPAN31Q12999 210 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 CDK5R2Q13319 367 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 TUBA3CQ13748 450 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 GINS1Q14691 196 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 PLPPR5Q32ZL2 321 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 CLEC12AQ5QGZ9 265 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 WBP2NLQ6ICG8 309 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 SPINK14Q6IE38 97 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 SLC30A6Q6NXT4 461 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 TUBA3EQ6PEY2 450 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 ULK3Q6PHR2 472 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 CD300LDQ6UXZ3 194 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 VASH1Q7L8A9 365 aaPredicted RBP7.91□□□□□ -1.14
RIF1-208ENST00000457745 SLC15A4Q8N697 577 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 LRRC75AQ8NAA5 344 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 MOSPD2Q8NHP6 518 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 ZPLD1Q8TCW7 415 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 TAAR8Q969N4 342 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 BPIFA2Q96DR5 249 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 FRMD6Q96NE9 622 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 RDH12Q96NR8 316 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 TNFRSF13CQ96RJ3 184 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 ANGPTL4Q9BY76 406 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 METTL7AQ9H8H3 244 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 CACYBPQ9HB71 228 aaKnown RBP7.91□□□□□ -1.14
RIF1-208ENST00000457745 RASSF1Q9NS23 344 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 MED17Q9NVC6 651 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 TUBA8Q9NY65 449 aaPredicted RBP7.91□□□□□ -1.14
RIF1-208ENST00000457745 TAS2R10Q9NYW0 307 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 MRTO4Q9UKD2 239 aaKnown RBP7.91□□□□□ -1.14
RIF1-208ENST00000457745 SIGLEC7Q9Y286 467 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 GMPPBQ9Y5P6 360 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 DCHS1Q96JQ0 3298 aa7.91□□□□□ -1.14
RIF1-208ENST00000457745 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 TMED7-TICAM2A0A0A6YYA0 188 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 ZNF814B7Z6K7 855 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 MCIDASD6RGH6 385 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 ETV2O00321 342 aaPredicted RBP7.9□□□□□ -1.14
RIF1-208ENST00000457745 ZIC3O60481 467 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 TRIM3O75382 744 aaPredicted RBP7.9□□□□□ -1.14
RIF1-208ENST00000457745 CELA3AP09093 270 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 SLC1A3P43003 542 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 DLX5P56178 289 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 B3GALT5-AS1P59052 145 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 EFNB1P98172 346 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 IL5RAQ01344 420 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 FOXO1Q12778 655 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 KEAP1Q14145 624 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 ZNF362Q5T0B9 420 aaPredicted RBP7.9□□□□□ -1.14
RIF1-208ENST00000457745 OPN5Q6U736 354 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 RASSF6Q6ZTQ3 369 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 TMPRSS11FQ6ZWK6 438 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 THAP5Q7Z6K1 395 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 ZNF440Q8IYI8 595 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 ZNF786Q8N393 782 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 TMEM156Q8N614 296 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 MDS2Q8NDY4 140 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 BBS1Q8NFJ9 593 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 OR51A7Q8NH64 312 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 ZNF563Q8TA94 476 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 FAM81AQ8TBF8 368 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 OIT3Q8WWZ8 545 aa7.9□□□□□ -1.14
RIF1-208ENST00000457745 NR4A3Q92570 626 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms