RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 KANK2Q63ZY3 851 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 TRMT10CQ7L0Y3 403 aaKnown RBP11.3□□□□□ -0.6
PTPA-224ENST00000453358 CCDC103Q8IW40 242 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 C17orf78Q8N4C9 275 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 ZHX1-C8orf76Q96EF9 292 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 DNAJA3Q96EY1 480 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 ARL5BQ96KC2 179 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 SOX7Q9BT81 388 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 CCDC106Q9BWC9 280 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 C12orf65Q9H3J6 166 aaKnown RBP11.3□□□□□ -0.6
PTPA-224ENST00000453358 SERHL2Q9H4I8 314 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 TBK1Q9UHD2 729 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 DCTN4Q9UJW0 460 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 AMDHD2Q9Y303 409 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 DNAJC15Q9Y5T4 150 aa11.3□□□□□ -0.6
PTPA-224ENST00000453358 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.3□□□□□ -0.6
PTPA-224ENST00000453358 LOC390937A0A1W2PQ73 354 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 DNPH1O43598 174 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 UGT2B17O75795 530 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 CSTAP01040 98 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 UBTFL6P0CB48 400 aaPredicted RBP11.29□□□□□ -0.6
PTPA-224ENST00000453358 CPA3P15088 417 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 ZNF23P17027 643 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 PGCP20142 388 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 RPL3P39023 403 aaKnown RBP11.29□□□□□ -0.6
PTPA-224ENST00000453358 APOBEC1P41238 236 aaKnown RBP11.29□□□□□ -0.6
PTPA-224ENST00000453358 RPS26P62854 115 aaKnown RBP11.29□□□□□ -0.6
PTPA-224ENST00000453358 GPR68Q15743 365 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 CARTPTQ16568 116 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 WHAMMP3Q1A5X7 153 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 CCDC153Q494R4 210 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 CASP12Q6UXS9 341 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 OLIG3Q7RTU3 272 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 MEX3DQ86XN8 651 aaKnown RBP11.29□□□□□ -0.6
PTPA-224ENST00000453358 RFLNBQ8N5W9 214 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 FAM71CQ8NEG0 241 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 OR5AK3PQ8NH89 298 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 MOAP1Q96BY2 351 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 COQ8BQ96D53 544 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 OR11A1Q9GZK7 315 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 CTPS2Q9NRF8 586 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 SLC7A10Q9NS82 523 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 GIMAP2Q9UG22 337 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 CHRNA9Q9UGM1 479 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 MOKQ9UQ07 419 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 HDGFL3Q9Y3E1 203 aa11.29□□□□□ -0.6
PTPA-224ENST00000453358 SPIN1Q9Y657 262 aaPredicted RBP11.29□□□□□ -0.6
PTPA-224ENST00000453358 PKD1L1Q8TDX9 2849 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 TMEM114B3SHH9 223 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 ANKRD28O15084 1053 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 TCF21O43680 179 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 FCMRO60667 390 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 BCAS1O75363 584 aaPredicted RBP11.28□□□□□ -0.6
PTPA-224ENST00000453358 STX11O75558 287 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 CHEK2O96017 543 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 ITGA2P17301 1181 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 CRHR1P34998 444 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 SNRPD2P62316 118 aaKnown RBP11.28□□□□□ -0.6
PTPA-224ENST00000453358 H3F3AP84243 136 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 PTGR1Q14914 329 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 MAPK14Q16539 360 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 LSM12Q3MHD2 195 aaKnown RBP11.28□□□□□ -0.6
PTPA-224ENST00000453358 IQCCQ4KMZ1 466 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 C1QTNF12Q5T7M4 302 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 TSPO2Q5TGU0 170 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 EIF3MQ7L2H7 374 aaKnown RBP11.28□□□□□ -0.6
PTPA-224ENST00000453358 DDIASQ8IXT1 998 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 CNPY4Q8N129 248 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 NATD1Q8N6N6 113 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 ANKS4BQ8N8V4 417 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 CCDC63Q8NA47 563 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 TWIST2Q8WVJ9 160 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 GATA5Q9BWX5 397 aaPredicted RBP11.28□□□□□ -0.6
PTPA-224ENST00000453358 BPESC1Q9GZL8 116 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 ZNF350Q9GZX5 532 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 MYOZ1Q9NP98 299 aaPredicted RBP11.28□□□□□ -0.6
PTPA-224ENST00000453358 ATAD3AQ9NVI7 634 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 UPB1Q9UBR1 384 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 MKLN1Q9UL63 735 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 FLVCR1Q9Y5Y0 555 aa11.28□□□□□ -0.6
PTPA-224ENST00000453358 TMEM233B4DJY2 109 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 PIP5K1BO14986 540 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 AK1P00568 194 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 MATN1P21941 496 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 MAPK1P28482 360 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 MPGP29372 298 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 PGM1P36871 562 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 MAGEA8P43361 318 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 CCT5P48643 541 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 CLK1P49759 484 aaKnown RBP11.27□□□□□ -0.61
PTPA-224ENST00000453358 OR2B6P58173 313 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 PRPS1P60891 318 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 HBA1P69905 142 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 TGFBR3Q03167 851 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 ARHGAP11BQ3KRB8 267 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 UGT3A2Q3SY77 523 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 SLC46A3Q7Z3Q1 461 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 GRINAQ7Z429 371 aa11.27□□□□□ -0.61
PTPA-224ENST00000453358 LSRQ86X29 649 aaPredicted RBP11.27□□□□□ -0.61
PTPA-224ENST00000453358 ADGRG3Q86Y34 549 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms