RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 SLC25A47Q6Q0C1 308 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 RBMS3Q6XE24 437 aaKnown RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 KDM7AQ6ZMT4 941 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 FOXL2NBQ6ZUU3 175 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 Q6ZVQ6 151 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 SLC26A9Q7LBE3 791 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 PTAR1Q7Z6K3 402 aaPredicted RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 LHFPL4Q7Z7J7 247 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 SETD3Q86TU7 594 aaPredicted RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 NFE4Q86UQ8 179 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 SLC47A2Q86VL8 602 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 HORMAD1Q86X24 394 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ERICH1Q86X53 443 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 STPG4Q8N801 248 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 DCAF4L2Q8NA75 395 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 MLKLQ8NB16 471 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 OR2T11Q8NH01 316 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 GIPC3Q8TF64 312 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 KLK6Q92876 244 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 NKX3-1Q99801 234 aaPredicted RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 NDUFAF3Q9BU61 184 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 CALN1Q9BXU9 219 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ZYG11BQ9C0D3 744 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 WDR76Q9H967 626 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ACP6Q9NPH0 428 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 FANCFQ9NPI8 374 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 MIOXQ9UGB7 285 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 DNAJC12Q9UKB3 198 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 HS3ST2Q9Y278 367 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ZNF175Q9Y473 711 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 RNF115Q9Y4L5 304 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 ANGPTL3Q9Y5C1 460 aa3.72□□□□□ -1.81
LINC00393-202ENST00000452852 KLF2Q9Y5W3 355 aaPredicted RBP3.72□□□□□ -1.81
LINC00393-202ENST00000452852 LRRK1Q38SD2 2015 aa3.71□□□□□ -1.81
LINC00393-202ENST00000452852 GOLGA8SH3BPF8 625 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 K7EQM0 130 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 MAGEB3O15480 346 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 SNAP91O60641 907 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF821O75541 412 aaPredicted RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 TRMUO75648 421 aaKnown RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 PALMO75781 387 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 KRT33AO76009 404 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 ANXA9O76027 345 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 LSM8O95777 96 aaKnown RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 GOT2P00505 430 aaKnown RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 ATP1A1P05023 1023 aaKnown RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 UGT2B4P06133 528 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 UMODP07911 640 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 FAM157CP0CG43 387 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 ADRB3P13945 408 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 DPP4P27487 766 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 PTPN6P29350 595 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 UCNP55089 124 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 SNRPD1P62314 119 aaKnown RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 SPIBQ01892 262 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 RAD51Q06609 339 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 CCDC173Q0VFZ6 552 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 SRSF9Q13242 221 aaKnown RBP eCLIP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 EIF4EBP2Q13542 120 aaPredicted RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 KRTAP24-1Q3LI83 254 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 SLC25A52Q3SY17 297 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 PTPN20Q4JDL3 420 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 SPANXN4Q5MJ08 99 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 PIP5KL1Q5T9C9 394 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 ATP1A1-AS1Q5TC04 95 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 TAF3Q5VWG9 929 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 RWDD4Q6NW29 188 aaKnown RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 C22orf39Q6P5X5 142 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 Q6ZSR6 202 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 SMIM29Q86T20 159 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 TRPT1Q86TN4 253 aaKnown RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 PARGQ86W56 976 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 DND1Q8IYX4 353 aaKnown RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 LSMEM2Q8N112 164 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 ZCCHC7Q8N3Z6 543 aaKnown RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF248Q8NDW4 579 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF397Q8NF99 534 aaPredicted RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 OR2A12Q8NGT7 310 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 OR4C6Q8NH72 309 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 MAPK15Q8TD08 544 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 FGF11Q92914 225 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 MRPL24Q96A35 216 aaKnown RBP3.71□□□□□ -1.82
LINC00393-202ENST00000452852 FAM131CQ96AQ9 280 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 OMA1Q96E52 524 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 UHRF2Q96PU4 802 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 RAB40CQ96S21 281 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF607Q96SK3 696 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 PSMB7Q99436 277 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 NPY6RQ99463 290 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 LGMNQ99538 433 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 GPA33Q99795 319 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 SLC25A19Q9HC21 320 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 SDF2L1Q9HCN8 221 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 MAN2C1Q9NTJ4 1040 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 MED17Q9NVC6 651 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 NLGN3Q9NZ94 848 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 MDFICQ9P1T7 246 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 ATP6V1HQ9UI12 483 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 CA5BQ9Y2D0 317 aa3.71□□□□□ -1.82
LINC00393-202ENST00000452852 OR51B4Q9Y5P0 310 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms