RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ADAM19Q9H013 955 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 PIF1Q9H611 641 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 RNF122Q9H9V4 155 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 TIGARQ9NQ88 270 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 NPDC1Q9NQX5 325 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-202ENST00000452372 ADAM21Q9UKJ8 722 aa17.88■□□□□ 0.45
COL9A3-202ENST00000452372 M0QX08 132 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 TPST1O60507 370 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 SHOX2O60902 331 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-202ENST00000452372 MFN2O95140 757 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 CRHP06850 196 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 FCGR2AP12318 317 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 PRG2P13727 222 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 BMP5P22003 454 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 COPZ1P61923 177 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 INTS11Q5TA45 600 aaKnown RBP17.87■□□□□ 0.45
COL9A3-202ENST00000452372 EEF1A1P5Q5VTE0 462 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 HACD2Q6Y1H2 254 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 ARPINQ7Z6K5 226 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 PATL1Q86TB9 770 aaKnown RBP17.87■□□□□ 0.45
COL9A3-202ENST00000452372 SLC25A43Q8WUT9 341 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-202ENST00000452372 REXO5Q96IC2 774 aaKnown RBP17.87■□□□□ 0.45
COL9A3-202ENST00000452372 LRRC37BQ96QE4 947 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 HOPXQ9BPY8 73 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-202ENST00000452372 SFXN3Q9BWM7 321 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 CHRNA9Q9UGM1 479 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 OSGIN1Q9UJX0 560 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 MCTS1Q9ULC4 181 aaKnown RBP17.87■□□□□ 0.45
COL9A3-202ENST00000452372 AP3M1Q9Y2T2 418 aa17.87■□□□□ 0.45
COL9A3-202ENST00000452372 SPIN1Q9Y657 262 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-202ENST00000452372 MED13LQ71F56 2210 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 FRS3O43559 492 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 DCTN3O75935 186 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 SYNGR4O95473 234 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 FAM107AO95990 144 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 TACR3P29371 465 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 SLC7A1P30825 629 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 CLK1P49759 484 aaKnown RBP17.86■□□□□ 0.45
COL9A3-202ENST00000452372 POLR2HP52434 150 aaKnown RBP17.86■□□□□ 0.45
COL9A3-202ENST00000452372 MAP2K6P52564 334 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 AGFG1P52594 562 aaKnown RBP17.86■□□□□ 0.45
COL9A3-202ENST00000452372 DMTNQ08495 405 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 VEZF1Q14119 521 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 WBP2NLQ6ICG8 309 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 C8orf82Q6P1X6 216 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-202ENST00000452372 ERICH5Q6P6B1 374 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 MEX3BQ6ZN04 569 aaKnown RBP17.86■□□□□ 0.45
COL9A3-202ENST00000452372 CCDC80Q76M96 950 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 GCNT2Q8N0V5 402 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 RELL2Q8NC24 303 aaPredicted RBP17.86■□□□□ 0.45
COL9A3-202ENST00000452372 PRRG4Q9BZD6 226 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 COQ10BQ9H8M1 238 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 CMTM6Q9NX76 183 aa17.86■□□□□ 0.45
COL9A3-202ENST00000452372 TMED7-TICAM2A0A0A6YYA0 188 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 A0A1W2PNR3 127 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 AQP8O94778 261 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 RAC3P60763 192 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 GLIPR1L2Q4G1C9 344 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 SYT14P1Q58G82 188 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 GKAP1Q5VSY0 366 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-202ENST00000452372 COMTD1Q86VU5 262 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 SLC15A3Q8IY34 581 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 CPNE4Q96A23 557 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-202ENST00000452372 EVA1AQ9H8M9 152 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 KLHL28Q9NXS3 571 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 TMED7Q9Y3B3 224 aa17.85■□□□□ 0.45
COL9A3-202ENST00000452372 AKAP6Q13023 2319 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 A0A1W2PNV4 684 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 CCT8L1PA6NM43 557 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 ZNF208O43345 1280 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 TNFSF13O75888 250 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 C8BP07358 591 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 NUDT2P50583 147 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 ZNF239Q16600 458 aaKnown RBP17.84■□□□□ 0.45
COL9A3-202ENST00000452372 DUSP7Q16829 419 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 PPP4R4Q6NUP7 873 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 TMPPEQ6ZT21 453 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 CADM2Q8N3J6 435 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 SMYD1Q8NB12 490 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 OR5B2Q96R09 309 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 SRXN1Q9BYN0 137 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 MCCC2Q9HCC0 563 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 JKAMPQ9P055 326 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 SLC13A4Q9UKG4 626 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 USP22Q9UPT9 525 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 HDGFL3Q9Y3E1 203 aa17.84■□□□□ 0.45
COL9A3-202ENST00000452372 SETD2Q9BYW2 2564 aaPredicted RBP17.83■□□□□ 0.44
COL9A3-202ENST00000452372 FAM220BPB1ANY3 271 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 SYT5O00445 386 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 LGI1O95970 557 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 OPN1SWP03999 348 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 TFPIP10646 304 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 CCNA2P20248 432 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 KIR2DL2P43627 348 aaPredicted RBP17.83■□□□□ 0.44
COL9A3-202ENST00000452372 KCNJ5P48544 419 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 HOXC5Q00444 222 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 TLE4Q04727 773 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 GUSBP1Q15486 140 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 TESK1Q15569 626 aa17.83■□□□□ 0.44
COL9A3-202ENST00000452372 FBXL19-AS1Q494R0 122 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms