RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 KHKP50053 298 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 CLNS1AP54105 237 aaKnown RBP23.95■■□□□ 1.42
USP42-204ENST00000451154 STX3Q13277 289 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 FAM174BQ3ZCQ3 159 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 TIMM23BQ5SRD1 257 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 ABLIM2Q6H8Q1 611 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 UBE2J2Q8N2K1 259 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 ARFGAP2Q8N6H7 521 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 ZNF433Q8N7K0 673 aaPredicted RBP23.95■■□□□ 1.42
USP42-204ENST00000451154 OR11A1Q9GZK7 315 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 CENPHQ9H3R5 247 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 KCNK9Q9NPC2 374 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 CISD1Q9NZ45 108 aaKnown RBP23.95■■□□□ 1.42
USP42-204ENST00000451154 EMC3Q9P0I2 261 aa23.95■■□□□ 1.42
USP42-204ENST00000451154 SPIN1Q9Y657 262 aaPredicted RBP23.95■■□□□ 1.42
USP42-204ENST00000451154 ANK3Q12955 4377 aaKnown RBP23.94■■□□□ 1.42
USP42-204ENST00000451154 IGKV3D-15A0A087WSY6 115 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 HMGN4O00479 90 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 PGM3O95394 542 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 CD8AP01732 235 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 COX5AP20674 150 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 NTF4P34130 210 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 IDUAP35475 653 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 IDH2P48735 452 aaKnown RBP23.94■■□□□ 1.42
USP42-204ENST00000451154 UFM1P61960 85 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 PLAURQ03405 335 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 PDK3Q15120 406 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 DNAJC14Q6Y2X3 702 aaPredicted RBP23.94■■□□□ 1.42
USP42-204ENST00000451154 GRINAQ7Z429 371 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 RNF130Q86XS8 419 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 CCDC103Q8IW40 242 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 OIT3Q8WWZ8 545 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 CNOT9Q92600 299 aaKnown RBP23.94■■□□□ 1.42
USP42-204ENST00000451154 MEAF6Q9HAF1 191 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 NPAP1Q9NZP6 1156 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 HAO1Q9UJM8 370 aa23.94■■□□□ 1.42
USP42-204ENST00000451154 NOSIPQ9Y314 301 aaKnown RBP23.94■■□□□ 1.42
USP42-204ENST00000451154 ZNF716A6NP11 495 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 SHISA9B4DS77 424 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 E9PBE3 544 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 SNUPNO95149 360 aaKnown RBP23.93■■□□□ 1.42
USP42-204ENST00000451154 PMS2P2O95744 297 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 SYPL1Q16563 259 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 FBXW9Q5XUX1 488 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 ANKFN1Q8N957 763 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 ZHX1-C8orf76Q96EF9 292 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 CCDC115Q96NT0 180 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 PAIP2Q9BPZ3 127 aaKnown RBP23.93■■□□□ 1.42
USP42-204ENST00000451154 PARD6BQ9BYG5 372 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 BTNL2Q9UIR0 455 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 HDGFL3Q9Y3E1 203 aa23.93■■□□□ 1.42
USP42-204ENST00000451154 HEATR1Q9H583 2144 aaKnown RBP23.93■■□□□ 1.42
USP42-204ENST00000451154 CCDC154A6NI56 674 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 OR5H1A6NKK0 313 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 NDUFS7O75251 213 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 ALDOCP09972 364 aaKnown RBP23.92■■□□□ 1.42
USP42-204ENST00000451154 PTNP21246 168 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 ACVR1BP36896 505 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 OR2B6P58173 313 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 HPCAP84074 193 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 KRTAP1-1Q07627 177 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 DPY19L1Q2PZI1 675 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 P2RY8Q86VZ1 359 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 APH1AQ96BI3 265 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 INPP5KQ9BT40 448 aa23.92■■□□□ 1.42
USP42-204ENST00000451154 EXOSC3Q9NQT5 275 aaKnown RBP23.92■■□□□ 1.42
USP42-204ENST00000451154 RTTNQ86VV8 2226 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 CIB4A0PJX0 185 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 AP3D1O14617 1153 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 ABCD4O14678 606 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 RAD51DO75771 328 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 IGHV4-39P01824 125 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 IL12AP29459 219 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 BST1Q10588 318 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 ETFDHQ16134 617 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 LRRC34Q8IZ02 419 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 OR52N5Q8NH56 324 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 TRAF4Q9BUZ4 470 aaPredicted RBP23.91■■□□□ 1.42
USP42-204ENST00000451154 REG4Q9BYZ8 158 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 SLCO5A1Q9H2Y9 848 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 GDF2Q9UK05 429 aaPredicted RBP23.91■■□□□ 1.42
USP42-204ENST00000451154 CR1P17927 2039 aa23.91■■□□□ 1.42
USP42-204ENST00000451154 TMED7-TICAM2A0A0A6YYA0 188 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 CCT8L1PA6NM43 557 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 GSNP06396 782 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 CHRM4P08173 479 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 FKBP2P26885 142 aaKnown RBP23.9■■□□□ 1.42
USP42-204ENST00000451154 CDKN2CP42773 168 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 CLK1P49759 484 aaKnown RBP23.9■■□□□ 1.42
USP42-204ENST00000451154 CEP85LQ5SZL2 805 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 OGFOD2Q6N063 350 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 ZNF621Q6ZSS3 439 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 KIRREL3Q8IZU9 778 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 PIGXQ8TBF5 258 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 TRNT1Q96Q11 434 aaKnown RBP23.9■■□□□ 1.42
USP42-204ENST00000451154 PANX1Q96RD7 426 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 MDFIQ99750 246 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 SLC38A1Q9H2H9 487 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 ALG2Q9H553 416 aa23.9■■□□□ 1.42
USP42-204ENST00000451154 AIG1Q9NVV5 245 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms