RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 FHL1Q13642 323 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 TUBA3CQ13748 450 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 TOMM34Q15785 309 aaPredicted RBP12.99□□□□□ -0.33
USP39-207ENST00000450066 ZNF791Q3KP31 576 aaPredicted RBP12.99□□□□□ -0.33
USP39-207ENST00000450066 RTL4Q6ZR62 310 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 CYP4Z2PQ8N1L4 340 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 ARMC10Q8N2F6 343 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 LNX2Q8N448 690 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 OR10G3Q8NGC4 313 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 OR13F1Q8NGS4 319 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 OR51A7Q8NH64 312 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 MUL1Q969V5 352 aa12.99□□□□□ -0.33
USP39-207ENST00000450066 RYDENQ9NUL5 291 aaKnown RBP12.99□□□□□ -0.33
USP39-207ENST00000450066 YARS2Q9Y2Z4 477 aaKnown RBP12.99□□□□□ -0.33
USP39-207ENST00000450066 RPL36Q9Y3U8 105 aaKnown RBP12.99□□□□□ -0.33
USP39-207ENST00000450066 TRAV27A0A087WT01 109 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 BHLHE40O14503 412 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 TERTO14746 1132 aaKnown RBP12.98□□□□□ -0.33
USP39-207ENST00000450066 GMFGO60234 142 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 SEC14L2O76054 403 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 HPP00738 406 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 GP1BBP13224 206 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 LIMK1P53667 647 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 SUMO3P55854 103 aaPredicted RBP12.98□□□□□ -0.33
USP39-207ENST00000450066 ST3GAL4Q11206 333 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 QPRTQ15274 297 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 COL28A1Q2UY09 1125 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 FAR1Q8WVX9 515 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 PLEKHA8Q96JA3 519 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 TNFRSF13CQ96RJ3 184 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 ENKD1Q9H0I2 346 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 GALNT9Q9HCQ5 603 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 KLRF1Q9NZS2 232 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 OSGIN1Q9UJX0 560 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 ZFHX2Q9C0A1 2572 aaPredicted RBP12.98□□□□□ -0.33
USP39-207ENST00000450066 CCDC160A6NGH7 325 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 SNTNA6NMZ2 147 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 STMND1H3BQB6 276 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 OR7A10O76100 309 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 CH25HO95992 272 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 CXCR1P25024 350 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 C21orf33P30042 268 aaPredicted RBP12.98□□□□□ -0.33
USP39-207ENST00000450066 GRK5P34947 590 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 DLSTP36957 453 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 SOX3P41225 446 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 MASP1P48740 699 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 OPN5Q6U736 354 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 THSD4Q6ZMP0 1018 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 BCDIN3DQ7Z5W3 292 aaKnown RBP12.98□□□□□ -0.33
USP39-207ENST00000450066 TMPRSS12Q86WS5 348 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 STX19Q8N4C7 294 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 LIPHQ8WWY8 451 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 ZNF582Q96NG8 517 aaPredicted RBP12.98□□□□□ -0.33
USP39-207ENST00000450066 LHPPQ9H008 270 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 METTL7AQ9H8H3 244 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 MCCC2Q9HCC0 563 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 ACOT13Q9NPJ3 140 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 SDHAF3Q9NRP4 125 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 TAS2R10Q9NYW0 307 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 FBXL4Q9UKA2 621 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 BAIAP2Q9UQB8 552 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 GPR52Q9Y2T5 361 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 ZNF337Q9Y3M9 751 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 PCDHGB6Q9Y5F9 930 aa12.98□□□□□ -0.33
USP39-207ENST00000450066 ANKUB1A6NFN9 424 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 TP53I11O14683 189 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 FADS2O95864 444 aaKnown RBP12.97□□□□□ -0.33
USP39-207ENST00000450066 STSP08842 583 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 MAP2K4P45985 399 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 POLR2HP52434 150 aaKnown RBP12.97□□□□□ -0.33
USP39-207ENST00000450066 EGR4Q05215 589 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 ZNF91Q05481 1191 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 CNPY1Q3B7I2 92 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 SLC46A3Q7Z3Q1 461 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 GRINAQ7Z429 371 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 RPS19BP1Q86WX3 136 aaKnown RBP12.97□□□□□ -0.33
USP39-207ENST00000450066 DND1Q8IYX4 353 aaKnown RBP12.97□□□□□ -0.33
USP39-207ENST00000450066 RORBQ92753 470 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 IFT27Q9BW83 186 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 CUL9Q8IWT3 2517 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 IGLV3-32A0A0A0MS00 114 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 C2orf72A6NCS6 295 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 ZNF99A8MXY4 864 aaPredicted RBP12.97□□□□□ -0.33
USP39-207ENST00000450066 KDM4EB2RXH2 506 aaPredicted RBP12.97□□□□□ -0.33
USP39-207ENST00000450066 PRODHO43272 600 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 RAD1O60671 282 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 DBTP11182 482 aaKnown RBP12.97□□□□□ -0.33
USP39-207ENST00000450066 CSRP1P21291 193 aaKnown RBP12.97□□□□□ -0.33
USP39-207ENST00000450066 F8A1P23610 371 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 MSX1P28360 303 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 SLC6A6P31641 620 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 PTGDSP41222 190 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 CASP3P42574 277 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 HTR3AP46098 478 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 SSR4P51571 173 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 MLLT10P55197 1068 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 MLF1P58340 268 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 CHAF1BQ13112 559 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 SNTA1Q13424 505 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 ZNF74Q16587 644 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms