RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 MMP28Q9H239 520 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 TMEM185BQ9H7F4 350 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 COQ10BQ9H8M1 238 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 TIGARQ9NQ88 270 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 SDHAF3Q9NRP4 125 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 ASB6Q9NWX5 421 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 C11orf21Q9P2W6 132 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 CRNNQ9UBG3 495 aaPredicted RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 PHF11Q9UIL8 331 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 ABCG2Q9UNQ0 655 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 VDAC3Q9Y277 283 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 PLLPQ9Y342 182 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 ASB4Q9Y574 426 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 ATP6V1DQ9Y5K8 247 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 MAD1L1Q9Y6D9 718 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 IGHV3OR16-10A0A075B7F0 116 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 A0A087WZY1 265 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 ZNF816-ZNF321PA0A0X1KG74 233 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 A0A1W2PR48 441 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 GLOD5A6NK44 160 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 PFDN6O15212 129 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 CYTIPO60759 359 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 H2AFYO75367 372 aaKnown RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 FOXH1O75593 365 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 GAS8O95995 478 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 LHBP01229 141 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 IGHV3-9P01782 118 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 TPM2P07951 284 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 CDH2P19022 906 aaPredicted RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 GNAZP19086 355 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 NMBRP28336 390 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 SSR2P43308 183 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 EIF3EP60228 445 aaKnown RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 PRPS1P60891 318 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 TIAL1Q01085 375 aaKnown RBP eCLIP2.73□□□□□ -1.973e-9■■■■■ 32.4
PMS1-215ENST00000447232 STX5Q13190 355 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 EXOSC7Q15024 291 aaKnown RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 AP5B1Q2VPB7 878 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 PLPPR5Q32ZL2 321 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 C3orf36Q3SXR2 165 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 TMEM35AQ53FP2 167 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 ODF2Q5BJF6 829 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 PCID2Q5JVF3 399 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 CPTPQ5TA50 214 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 DARS2Q6PI48 645 aaKnown RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 GALNT5Q7Z7M9 940 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 RHOT2Q8IXI1 618 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 ZNF100Q8IYN0 542 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 KRT78Q8N1N4 520 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 POC1BQ8TC44 478 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 DUSP19Q8WTR2 217 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 FAM71F1Q96KD3 344 aaPredicted RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 RNF145Q96MT1 663 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 NAP1L3Q99457 506 aaPredicted RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 FAM167BQ9BTA0 163 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 MRI1Q9BV20 369 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 SORBS1Q9BX66 1292 aaKnown RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 ZNF717Q9BY31 904 aaPredicted RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 MS4A5Q9H3V2 200 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 IARS2Q9NSE4 1012 aaKnown RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 INTS10Q9NVR2 710 aaKnown RBP2.73□□□□□ -1.97
PMS1-215ENST00000447232 MAT2BQ9NZL9 334 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 FLRT3Q9NZU0 649 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 WIPI2Q9Y4P8 454 aa2.73□□□□□ -1.97
PMS1-215ENST00000447232 IGKV3D-15A0A087WSY6 115 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 IGHV3-15A0A0B4J1V0 119 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 C9JVG2 144 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 M0R233 179 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 CLGNO14967 610 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 PGRMC2O15173 223 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 ANGPTL7O43827 346 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 EFNA2O43921 213 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 ZNF189O75820 626 aaPredicted RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 ZNF432O94892 652 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 VAPBO95292 243 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 IGLV1-44P01699 117 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 IGHMP01871 453 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 H2AFZP0C0S5 128 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 CECR9P0C854 216 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 NR2F6P10588 404 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 TCN1P20061 433 aaPredicted RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 LMO1P25800 156 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 IL12BP29460 328 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 SDHAP31040 664 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 RPL4P36578 427 aaKnown RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 CASP2P42575 452 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 PSPHP78330 225 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 CSTF3Q12996 717 aaKnown RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 TCTEX1D4Q5JR98 221 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 OR4C11Q6IEV9 310 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 ANKRD16Q6P6B7 361 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 NPSR1Q6W5P4 371 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 H2AFVQ71UI9 128 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 OTUD6BQ8N6M0 293 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 ZNF527Q8NB42 609 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 ADAMTS16Q8TE57 1224 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 ZNF473Q8WTR7 871 aaKnown RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 SSMEM1Q8WWF3 244 aa2.72□□□□□ -1.97
PMS1-215ENST00000447232 EFHD2Q96C19 240 aaPredicted RBP2.72□□□□□ -1.97
PMS1-215ENST00000447232 MFSD3Q96ES6 412 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms