RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MTG2Q9H4K7 406 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 ZNF286AQ9HBT8 521 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 INTS6Q9UL03 887 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 A8MVM7 634 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 INMT-MINDY4F8WBC2 141 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 DPM1O60762 260 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 NSA2O95478 260 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 IL2RAP01589 272 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 CHRM4P08173 479 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 CCL11P51671 97 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 GRINAQ7Z429 371 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 PIANPQ8IYJ0 282 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 LINC01465Q8N7H1 131 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 OR51D1Q8NGF3 324 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 NMNAT1Q9HAN9 279 aaPredicted RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 PRDM4Q9UKN5 801 aa7.97□□□□□ -1.13
PTPN3-204ENST00000446349 YARS2Q9Y2Z4 477 aaKnown RBP7.97□□□□□ -1.13
PTPN3-204ENST00000446349 GABBR2O75899 941 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 NPR2P20594 1047 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 PTGS2P35354 604 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 MEPCEQ7L2J0 689 aaKnown RBP7.96□□□□□ -1.13
PTPN3-204ENST00000446349 LMNTD1Q8N9Z9 388 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 OR13J1Q8NGT2 312 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 OR8K3Q8NH51 312 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 CNOT9Q92600 299 aaKnown RBP7.96□□□□□ -1.13
PTPN3-204ENST00000446349 A4GALTQ9NPC4 353 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 TMEM221A6NGB7 291 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 SLC1A7O00341 560 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 PLRG1O43660 514 aaKnown RBP7.96□□□□□ -1.13
PTPN3-204ENST00000446349 UTS2O95399 124 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 IFNA10P01566 189 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 ADARB1P78563 741 aaKnown RBP7.96□□□□□ -1.13
PTPN3-204ENST00000446349 TSPAN31Q12999 210 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 FAM53BQ14153 422 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 SIX1Q15475 284 aaPredicted RBP7.96□□□□□ -1.13
PTPN3-204ENST00000446349 EMC4Q5J8M3 183 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 CTSL3PQ5NE16 218 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 BEST3Q8N1M1 668 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 CASTOR1Q8WTX7 329 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 ATOH8Q96SQ7 321 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 TMEM181Q9P2C4 612 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 ENPP5Q9UJA9 477 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 METTL15A6NJ78 407 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 DENRO43583 198 aaKnown RBP7.96□□□□□ -1.13
PTPN3-204ENST00000446349 IL2RGP31785 369 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 CX3CR1P49238 355 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 PPP5CP53041 499 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 NADK2Q4G0N4 442 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 GJC3Q8NFK1 279 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 CCDC120Q96HB5 630 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 NKX3-1Q99801 234 aaPredicted RBP7.96□□□□□ -1.13
PTPN3-204ENST00000446349 DPH1Q9BZG8 443 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 MOB1AQ9H8S9 216 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 TREM1Q9NP99 234 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 CSNK1G3Q9Y6M4 447 aa7.96□□□□□ -1.13
PTPN3-204ENST00000446349 TRIP12Q14669 1992 aaPredicted RBP7.96□□□□□ -1.13
PTPN3-204ENST00000446349 MCRIP1C9JLW8 97 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 ADAM12O43184 909 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 HOXD12P35452 270 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 MRPL58Q14197 206 aaKnown RBP7.96□□□□□ -1.14
PTPN3-204ENST00000446349 ENTPD8Q5MY95 495 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 METTL11BQ5VVY1 283 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 TMEM211Q6ICI0 200 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 PARM1Q6UWI2 310 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 SSX8Q7RTT4 187 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 FOXRED2Q8IWF2 684 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 LILRB2Q8N423 598 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 MUS81Q96NY9 551 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 SULT4A1Q9BR01 284 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 DUSP22Q9NRW4 184 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 UBR3Q6ZT12 1888 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 SLC22A23A1A5C7 686 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 HSPB2A8KAH6 182 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 FZD7O75084 574 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 OR2T7P0C7T2 308 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 ARSBP15848 533 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 SLC2A5P22732 501 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 RGS19P49795 217 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 HSPB2Q16082 182 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 DPY19L2P2Q6ZN68 376 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 NKAIN3Q8N8D7 197 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 OR2T27Q8NH04 317 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 RELTQ969Z4 430 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 NEURL3Q96EH8 262 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 BIRC8Q96P09 236 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 TSSK2Q96PF2 358 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 MLXQ9UH92 298 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 SHISA7A6NL88 538 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 ZNF891A8MT65 544 aaPredicted RBP7.96□□□□□ -1.14
PTPN3-204ENST00000446349 ELAVL4P26378 380 aaKnown RBP7.96□□□□□ -1.14
PTPN3-204ENST00000446349 IL11RAQ14626 422 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 COL28A1Q2UY09 1125 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 ZNF322Q6U7Q0 402 aaPredicted RBP7.96□□□□□ -1.14
PTPN3-204ENST00000446349 TAAR9Q96RI9 348 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 NICN1Q9BSH3 213 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 EDEM2Q9BV94 578 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 SPACA1Q9HBV2 294 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 RASD1Q9Y272 281 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 STMND1H3BQB6 276 aa7.96□□□□□ -1.14
PTPN3-204ENST00000446349 GPR39O43194 453 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms