RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 BPIFA1Q9NP55 256 aa5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 RAB18Q9NP72 206 aa5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 CCDC59Q9P031 241 aaKnown RBP5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 PHF11Q9UIL8 331 aa5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 RIMS3Q9UJD0 308 aa5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ANAPC7Q9UJX3 599 aa5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 AGO1Q9UL18 857 aaKnown RBP5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 OAZ3Q9UMX2 235 aa5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 SLC22A13Q9Y226 551 aa5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 MMACHCQ9Y4U1 282 aa5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 AUP1Q9Y679 476 aa5.39□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 LINC00862A6NCI5 91 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 NEMP2A6NFY4 417 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 DIRC3C9JPN6 131 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 SGK494L7N484 410 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 SLC28A1O00337 649 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 EEF2KO00418 725 aaKnown RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 PPP6CO00743 305 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 TCAPO15273 167 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 FLRT2O43155 660 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 SLC28A2O43868 658 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 TIMM8AO60220 97 aaPredicted RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 SCO1O75880 301 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ACSL3O95573 720 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 PTTG1O95997 202 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 GOT2P00505 430 aaKnown RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ELANEP08246 267 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 UBCP0CG48 685 aaKnown RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 CYP11B1P15538 503 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 RAB3AP20336 220 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 GLRA1P23415 457 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ACADLP28330 430 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 GNPDA1P46926 289 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 NPBWR1P48145 328 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 MAPK12P53778 367 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 CLDN2P57739 230 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ERVS71-1P61550 626 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 CXADRP78310 365 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 SREBF2Q12772 1141 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ITPRIPL2Q3MIP1 535 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 COX19Q49B96 90 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 C6orf141Q5SZD1 244 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 TMEM268Q5VZI3 342 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 TMEM65Q6PI78 240 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 CBLN3Q6UW01 205 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 MPZL3Q6UWV2 235 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 LRRC55Q6ZSA7 311 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 FAM92BQ6ZTR7 304 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 MDGA2Q7Z553 956 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 HS3ST5Q8IZT8 346 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 OR5T2Q8NGG2 359 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 OR4D10Q8NGI6 311 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 M1APQ8TC57 530 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 DNAJB3Q8WWF6 145 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 UFD1Q92890 307 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 YIPF5Q969M3 257 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 LMLNQ96KR4 655 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ZNF597Q96LX8 424 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 CASD1Q96PB1 797 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 TSSK1BQ9BXA7 367 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 NMUR2Q9GZQ4 415 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ZNF556Q9HAH1 456 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 FBXO8Q9NRD0 319 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ACSL5Q9ULC5 683 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 POMPQ9Y244 141 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 POLR3HQ9Y535 204 aaPredicted RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 CROCCQ5TZA2 2017 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 COL2A1P02458 1487 aaPredicted RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 RNASEK-C17orf49H0YIS7 233 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 SRP72O76094 671 aaKnown RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 KCNK2O95069 426 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 GP1BAP07359 652 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 CHRNGP07510 517 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 TRAPPC2P0DI81 140 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 TRAPPC2BP0DI82 140 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 PET100P0DJ07 73 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 VPREB1P12018 145 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 B4GALT1P15291 398 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 GTF2E2P29084 291 aaKnown RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 IL12AP29459 219 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 COMPP49747 757 aaPredicted RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 SNAP25P60880 206 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 HERV-K104P63124 156 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ADARB1P78563 741 aaKnown RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ADORA2A-AS1P86434 159 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 CAV1Q03135 178 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 RIPPLY1Q0D2K3 151 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 FUT7Q11130 342 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 NME3Q13232 169 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 TRAM2Q15035 370 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 P2RY14Q15391 338 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 SLC1A5Q15758 541 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 RBBP7Q16576 425 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 MICBQ29980 383 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ZNF699Q32M78 642 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 XP32Q5T750 250 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 MEDAGQ5VYS4 303 aa5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 SP5Q6BEB4 398 aaPredicted RBP5.38□□□□□ -1.55
ALMS1-IT1-201ENST00000441587 ANKRD16Q6P6B7 361 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms