RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 CFAP157Q5JU67 520 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 ATAD3BQ5T9A4 648 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 TPGS2Q68CL5 300 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 TPRA1Q86W33 373 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 VSTM4Q8IW00 320 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 MTURNQ8N3F0 131 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 CLDN19Q8N6F1 224 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 ARL6IP6Q8N6S5 226 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 OR4D9Q8NGE8 314 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 OR52M1Q8NGK5 317 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 OR56B4Q8NH76 319 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 PIGCQ92535 297 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 NUS1Q96E22 293 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 PLEKHF1Q96S99 279 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 TBX15Q96SF7 602 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 PTGES2Q9H7Z7 377 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 ONECUT1Q9UBC0 465 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 WARS2Q9UGM6 360 aaKnown RBP2.5□□□□□ -2.01
VPS41-207ENST00000439468 TBK1Q9UHD2 729 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 DISP1Q96F81 1524 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 SPHKAPQ2M3C7 1700 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 WDR90Q96KV7 1748 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 DEPDC5O75140 1603 aa2.5□□□□□ -2.01
VPS41-207ENST00000439468 TNIKQ9UKE5 1360 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 CROCCQ5TZA2 2017 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 KIF16BQ96L93 1317 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 TNS1Q9HBL0 1735 aaKnown RBP2.49□□□□□ -2.01
VPS41-207ENST00000439468 SMIM28A0A1B0GU29 152 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 A0A1B0GWB2 263 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 MBLAC1A4D2B0 266 aaPredicted RBP2.49□□□□□ -2.01
VPS41-207ENST00000439468 EPOPA6NHQ4 379 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 GPR89AB7ZAQ6 455 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 HAT1O14929 419 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 MAGEB3O15480 346 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 ZNF264O43296 627 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 PRKYO43930 277 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 SERF1AO75920 110 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 TIMP1P01033 207 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 IGHDP01880 384 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 GPR89BP0CG08 455 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 RBMY1CP0DJD4 496 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 ZP3P21754 424 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 HMGB2P26583 209 aaKnown RBP2.49□□□□□ -2.01
VPS41-207ENST00000439468 OTX2P32243 289 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 CD80P33681 288 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 RDXP35241 583 aaKnown RBP2.49□□□□□ -2.01
VPS41-207ENST00000439468 LEPP41159 167 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 KIR2DS2P43631 304 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 PRKXP51817 358 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 BIDP55957 195 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 ELAVL3Q14576 367 aaKnown RBP2.49□□□□□ -2.01
VPS41-207ENST00000439468 LRRC36Q1X8D7 754 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 MAJINQ3KP22 176 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 FHL5Q5TD97 284 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 LIPNQ5VXI9 398 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 RGS9BPQ6ZS82 235 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 PPP1R42Q7Z4L9 355 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 ZNF589Q86UQ0 364 aaPredicted RBP2.49□□□□□ -2.01
VPS41-207ENST00000439468 TGIF2LYQ8IUE0 185 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 ZNF683Q8IZ20 524 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 SLC34A3Q8N130 599 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 TRMT10AQ8TBZ6 339 aaKnown RBP2.49□□□□□ -2.01
VPS41-207ENST00000439468 RAPGEF5Q92565 580 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 MARC2Q969Z3 335 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 TGM7Q96PF1 710 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 KLHDC3Q9BQ90 382 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 POLR1EQ9GZS1 481 aaKnown RBP2.49□□□□□ -2.01
VPS41-207ENST00000439468 MAGT1Q9H0U3 335 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 ABCB10Q9NRK6 738 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 TMEM9Q9P0T7 183 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 PCSK1NQ9UHG2 260 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 CLEC4AQ9UMR7 237 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 AK6Q9Y3D8 172 aaKnown RBP2.49□□□□□ -2.01
VPS41-207ENST00000439468 ITSN2Q9NZM3 1697 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 UNC13BO14795 1591 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 CFAP74Q9C0B2 1584 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 REREQ9P2R6 1566 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 DIP2CQ9Y2E4 1556 aa2.49□□□□□ -2.01
VPS41-207ENST00000439468 MAP3K1Q13233 1512 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.48□□□□□ -2.01
VPS41-207ENST00000439468 ZNF318Q5VUA4 2279 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 CLSPNQ9HAW4 1339 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 MAGI2Q86UL8 1455 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 IGHV1OR15-1A0A075B7D0 117 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 A0A0G2JRQ6 117 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 A0A1B0GUS0 222 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 NPIPA7E9PJI5 369 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 SPAG6O75602 509 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 LYPD3O95274 346 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 LY6G6DO95868 133 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 H2BFMP0C1H6 154 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 NPIPA8P0DM63 369 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 PNMTP11086 282 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 GLRA2P23416 452 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 FGF9P31371 208 aaPredicted RBP2.48□□□□□ -2.01
VPS41-207ENST00000439468 PRPHP41219 470 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 GBX2P52951 348 aaPredicted RBP2.48□□□□□ -2.01
VPS41-207ENST00000439468 SPIBQ01892 262 aa2.48□□□□□ -2.01
VPS41-207ENST00000439468 MAP2K1Q02750 393 aaPredicted RBP2.48□□□□□ -2.01
VPS41-207ENST00000439468 EGFEM1PQ0D2K5 195 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms