RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SLC23A2Q9UGH3 650 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 LOC100509620A0A075B734 347 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 A0A1B0GTH9 108 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 PTP4A3O75365 173 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 FBXO45P0C2W1 286 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 CYBAP13498 195 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 FPR3P25089 353 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 MAT2AP31153 395 aaKnown RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 FLT3LGP49771 235 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 POLR2LP62875 67 aaKnown RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 BAMBIQ13145 260 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 TMEM69Q5SWH9 247 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 PDSS1Q5T2R2 415 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 SLC8B1Q6J4K2 584 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 ZNRF4Q8WWF5 429 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 ZNF689Q96CS4 500 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 ZDHHC5Q9C0B5 715 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 MFFQ9GZY8 342 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 TMEM231Q9H6L2 316 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 SIDT1Q9NXL6 827 aaKnown RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 SPG21Q9NZD8 308 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 CAMK2AQ9UQM7 478 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 MTCL1Q9Y4B5 1905 aaKnown RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 A0A1W2PR48 441 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 PLPP2O43688 288 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 SBK2P0C263 348 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 F3P13726 295 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 EDNRAP25101 427 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 CERS1P27544 350 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 FOXK2Q01167 660 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 MRM1Q6IN84 353 aaKnown RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 ZC3H14Q6PJT7 736 aaKnown RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 OR52L1Q8NGH7 329 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 AHCYL2Q96HN2 611 aaKnown RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 GFI1Q99684 422 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 CMSS1Q9BQ75 279 aaKnown RBP12.37□□□□□ -0.43
ACTN1-204ENST00000438964 ADGRL4Q9HBW9 690 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 STARD7Q9NQZ5 370 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 ACTR10Q9NZ32 417 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 WDFY3Q8IZQ1 3526 aa12.37□□□□□ -0.43
ACTN1-204ENST00000438964 MAN2B1O00754 1011 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 CCSO14618 274 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 SELENOFO60613 162 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 KRT33AO76009 404 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 CDK2P24941 298 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 NTSP30990 170 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 GPR1P46091 355 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 KCNJ3P48549 501 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 ACSM1Q08AH1 577 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 CSRP2Q16527 193 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 GUCA2BQ16661 112 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 DEFB128Q7Z7B8 93 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 MUC20Q8N307 709 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-204ENST00000438964 TMEM185AQ8NFB2 350 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 NUP43Q8NFH3 380 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 DUSP19Q8WTR2 217 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 FBXO17Q96EF6 278 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 PINK1Q9BXM7 581 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 PBX4Q9BYU1 374 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 NKX6-2Q9C056 277 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-204ENST00000438964 TMEM185BQ9H7F4 350 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 SLC22A11Q9NSA0 550 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 ANKRD10Q9NXR5 420 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 SLC39A1Q9NY26 324 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 OPN4Q9UHM6 478 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 CSN2P05814 226 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 RPS27P42677 84 aaKnown RBP12.36□□□□□ -0.43
ACTN1-204ENST00000438964 IKZF1Q13422 519 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 FAM199XQ6PEV8 388 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-204ENST00000438964 FAM111BQ6SJ93 734 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 TFGQ92734 400 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-204ENST00000438964 SEC22AQ96IW7 307 aa12.36□□□□□ -0.43
ACTN1-204ENST00000438964 MYEF2Q9P2K5 600 aaKnown RBP12.36□□□□□ -0.43
ACTN1-204ENST00000438964 RAD1O60671 282 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PCDH8O95206 1070 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 LDOC1O95751 146 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-204ENST00000438964 TGM6O95932 706 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 STAT5AP42229 794 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 TNFRSF17Q02223 184 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 STX4Q12846 297 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 MAPK14Q16539 360 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 C4orf46Q504U0 113 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 LIN54Q6MZP7 749 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 MBOAT2Q6ZWT7 520 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PXKQ7Z7A4 578 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 OR6K6Q8NGW6 343 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 SNX33Q8WV41 574 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 FCAMRQ8WWV6 532 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 PELI1Q96FA3 418 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 CD180Q99467 661 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 ACTR6Q9GZN1 396 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 IL21RQ9HBE5 538 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 ENTPD4Q9Y227 616 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 HS3ST2Q9Y278 367 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 MDC1Q14676 2089 aaKnown RBP12.35□□□□□ -0.43
ACTN1-204ENST00000438964 CFAP54Q96N23 3096 aa12.35□□□□□ -0.43
ACTN1-204ENST00000438964 A0A1B0GUH1 482 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms