RNA–Protein interactions for RNA: ENST00000438874.6

TSG101-202, Transcript of tumor susceptibility 101, humanhuman

TSL 1 (best)

Gene TSG101, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-202ENST00000438874 REG4Q9BYZ8 158 aa16.56■□□□□ 0.24
TSG101-202ENST00000438874 EXOSC3Q9NQT5 275 aaKnown RBP16.56■□□□□ 0.24
TSG101-202ENST00000438874 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.56■□□□□ 0.24
TSG101-202ENST00000438874 SPIN1Q9Y657 262 aaPredicted RBP16.56■□□□□ 0.24
TSG101-202ENST00000438874 CUBNO60494 3623 aa16.56■□□□□ 0.24
TSG101-202ENST00000438874 MXRA5Q9NR99 2828 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 CLDN24A6NM45 220 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 DNPH1O43598 174 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 CRLF1O75462 422 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 SNUPNO95149 360 aaKnown RBP16.55■□□□□ 0.24
TSG101-202ENST00000438874 CPSF4O95639 269 aaKnown RBP16.55■□□□□ 0.24
TSG101-202ENST00000438874 PMS2P2O95744 297 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 NTF4P34130 210 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 KHKP50053 298 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 RPL14P50914 215 aaKnown RBP16.55■□□□□ 0.24
TSG101-202ENST00000438874 SLC16A1P53985 500 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 DMTNQ08495 405 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 FAPQ12884 760 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 DPY19L1Q2PZI1 675 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 MREGQ8N565 214 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 VPS37AQ8NEZ2 397 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 ZNF563Q8TA94 476 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 MUCL1Q96DR8 90 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 SSU72Q9NP77 194 aaKnown RBP16.55■□□□□ 0.24
TSG101-202ENST00000438874 CISD1Q9NZ45 108 aaKnown RBP16.55■□□□□ 0.24
TSG101-202ENST00000438874 HDGFL3Q9Y3E1 203 aa16.55■□□□□ 0.24
TSG101-202ENST00000438874 E9PBE3 544 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 HMGN4O00479 90 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 ABCD4O14678 606 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 NDUFS7O75251 213 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 IGHV3-9P01782 118 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 TFPIP10646 304 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 RYKP34925 604 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 CLK1P49759 484 aaKnown RBP16.54■□□□□ 0.24
TSG101-202ENST00000438874 CDH11P55287 796 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 CHRNEQ04844 493 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 KRT71Q3SY84 523 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 HMGN2P46Q86SG4 172 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 ADGRG3Q86Y34 549 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 PIGXQ8TBF5 258 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 APH1AQ96BI3 265 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 CCDC115Q96NT0 180 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 SLC35A5Q9BS91 424 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 NUF2Q9BZD4 464 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 OR11A1Q9GZK7 315 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 MALT1Q9UDY8 824 aa16.54■□□□□ 0.24
TSG101-202ENST00000438874 MARCOQ9UEW3 520 aaPredicted RBP16.54■□□□□ 0.24
TSG101-202ENST00000438874 NOSIPQ9Y314 301 aaKnown RBP16.54■□□□□ 0.24
TSG101-202ENST00000438874 CR1P17927 2039 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 TM9SF1O15321 606 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 RAD51DO75771 328 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 LBPP18428 481 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 FKBP2P26885 142 aaKnown RBP16.53■□□□□ 0.24
TSG101-202ENST00000438874 SLC1A6P48664 564 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 CLNS1AP54105 237 aaKnown RBP16.53■□□□□ 0.24
TSG101-202ENST00000438874 KCNJ10P78508 379 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 H3F3AP84243 136 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 FAM174BQ3ZCQ3 159 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 OGFOD2Q6N063 350 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 LSRQ86X29 649 aaPredicted RBP16.53■□□□□ 0.24
TSG101-202ENST00000438874 ARFGAP2Q8N6H7 521 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 CNOT9Q92600 299 aaKnown RBP16.53■□□□□ 0.24
TSG101-202ENST00000438874 ZHX1-C8orf76Q96EF9 292 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 DNAJA3Q96EY1 480 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 TEX37Q96LM6 180 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 ALG2Q9H553 416 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 MEAF6Q9HAF1 191 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.53■□□□□ 0.24
TSG101-202ENST00000438874 FAIMQ9NVQ4 179 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 BTNL2Q9UIR0 455 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 GDF2Q9UK05 429 aaPredicted RBP16.53■□□□□ 0.24
TSG101-202ENST00000438874 SLC25A15Q9Y619 301 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 PLCE1Q9P212 2302 aa16.53■□□□□ 0.24
TSG101-202ENST00000438874 AP3D1O14617 1153 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 GPR171O14626 319 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 ALDOCP09972 364 aaKnown RBP16.52■□□□□ 0.24
TSG101-202ENST00000438874 BGNP21810 368 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 CHI3L1P36222 383 aaPredicted RBP16.52■□□□□ 0.24
TSG101-202ENST00000438874 HPCAP84074 193 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 MPP2Q14168 576 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 GPAT3Q53EU6 434 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 RNF130Q86XS8 419 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 CCDC103Q8IW40 242 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 CMIPQ8IY22 773 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 UBE2J2Q8N2K1 259 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 RADILQ96JH8 1075 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 TRNT1Q96Q11 434 aaKnown RBP16.52■□□□□ 0.24
TSG101-202ENST00000438874 SLC38A1Q9H2H9 487 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 ASB6Q9NWX5 421 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 TAS2R16Q9NYV7 291 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 TRAPPC4Q9Y296 219 aa16.52■□□□□ 0.24
TSG101-202ENST00000438874 STAB1Q9NY15 2570 aa16.52■□□□□ 0.23
TSG101-202ENST00000438874 ABCA1O95477 2261 aa16.51■□□□□ 0.23
TSG101-202ENST00000438874 AGAP5A6NIR3 686 aa16.51■□□□□ 0.23
TSG101-202ENST00000438874 PDLIM1O00151 329 aa16.51■□□□□ 0.23
TSG101-202ENST00000438874 RGS16O15492 202 aaPredicted RBP16.51■□□□□ 0.23
TSG101-202ENST00000438874 CHRM4P08173 479 aa16.51■□□□□ 0.23
TSG101-202ENST00000438874 ITGA5P08648 1049 aa16.51■□□□□ 0.23
TSG101-202ENST00000438874 RPS4Y1P22090 263 aaKnown RBP16.51■□□□□ 0.23
TSG101-202ENST00000438874 S100A3P33764 101 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms