RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 ZNF665Q9H7R5 613 aa10.55□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 NOL11Q9H8H0 719 aaKnown RBP10.55□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 ZMAT3Q9HA38 289 aaKnown RBP10.55□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 SLC7A10Q9NS82 523 aa10.55□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 TEX264Q9Y6I9 313 aa10.55□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 A0A087WV62 115 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 KIF2AO00139 706 aaPredicted RBP10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 TIMM23O14925 209 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 MRPL33O75394 65 aaKnown RBP10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 NUDT14O95848 222 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 WNT11O96014 354 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 NGFRP08138 427 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 CECR9P0C854 216 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 STMN1P16949 149 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 PRKCAP17252 672 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 MPIP34949 423 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 DIO1P49895 249 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 TRA2BP62995 288 aaKnown RBP10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 TUBA1BP68363 451 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 TUBA4AP68366 448 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 ID3Q02535 119 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 ZKSCAN8Q15776 578 aaPredicted RBP10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 NDUFAF6Q330K2 333 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 ANKRD16Q6P6B7 361 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 GALNT18Q6P9A2 607 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 CCDC137Q6PK04 289 aaKnown RBP10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 TUBA1AQ71U36 451 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 MYPOPQ86VE0 399 aaPredicted RBP10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 OR2L13Q8N349 312 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 C1orf162Q8NEQ5 155 aaPredicted RBP10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 CEP70Q8NHQ1 597 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 MRAPQ8TCY5 172 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 GPR151Q8TDV0 419 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 JADE3Q92613 823 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 DNAJA3Q96EY1 480 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 TSPAN17Q96FV3 270 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 EQTNQ9NQ60 294 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 EMC3Q9P0I2 261 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 PYCARDQ9ULZ3 195 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 SOX21Q9Y651 276 aaPredicted RBP10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 COL7A1Q02388 2944 aa10.54□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 hCG_2014768A0A024R1R8 64 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 CXorf49A8MYA2 514 aaPredicted RBP10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 PDYNP01213 254 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 ANPEPP15144 967 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 ACHEP22303 614 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 NCBP2P52298 156 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 IFT88Q13099 833 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 SELENBP1Q13228 472 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 FRG1Q14331 258 aaKnown RBP10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 FAM189A2Q15884 450 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 MSMPQ1L6U9 139 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 EXOSC6Q5RKV6 272 aaKnown RBP10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 AVPI1Q5T686 147 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 TSPO2Q5TGU0 170 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 C11orf87Q6NUJ2 197 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 CMC1Q7Z7K0 106 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 NUP37Q8NFH4 326 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 FBXO30Q8TB52 745 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 GPR119Q8TDV5 335 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 RDH5Q92781 318 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 BBS4Q96RK4 519 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 GPR22Q99680 433 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 QRSL1Q9H0R6 528 aaKnown RBP10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 ZNF442Q9H7R0 627 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 C3orf14Q9HBI5 128 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 GIMAP4Q9NUV9 329 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 DDX18Q9NVP1 670 aaKnown RBP10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 UPB1Q9UBR1 384 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 CARD8Q9Y2G2 431 aa10.53□□□□□ -0.72
SMAD9-IT1-201ENST00000437983 MYO1GB0I1T2 1018 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 CLDN34H7C241 214 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 NR5A2O00482 541 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 DNALI1O14645 258 aaPredicted RBP10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 ZSCAN12O43309 604 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 CELA3BP08861 270 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 GFAPP14136 432 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SEC24CP53992 1094 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 TMEM33P57088 247 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 RAE1P78406 368 aaKnown RBP10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MVKQ03426 396 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 TRAF3Q13114 568 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 FASTKD3Q14CZ7 662 aaKnown RBP10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 PDK3Q15120 406 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 KLF17Q5JT82 389 aaPredicted RBP10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 KLHL24Q6TFL4 600 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 CASP12Q6UXS9 341 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 TMPPEQ6ZT21 453 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MTDHQ86UE4 582 aaKnown RBP10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 MISPQ8IVT2 679 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 CCDC103Q8IW40 242 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SAMD14Q8IZD0 417 aaPredicted RBP10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 OR4F15Q8NGB8 312 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 PHOSPHO1Q8TCT1 267 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 ATP6V1E2Q96A05 226 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 ELP4Q96EB1 424 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 NMRAL1Q9HBL8 299 aa10.52□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SULT2B1O00204 365 aa10.51□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 SCDO00767 359 aa10.51□□□□□ -0.73
SMAD9-IT1-201ENST00000437983 RP2O75695 350 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms