RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 SLC25A43Q8WUT9 341 aaPredicted RBP14.37□□□□□ -0.11
PTPRA-206ENST00000430705 TMEM234Q8WY98 164 aa14.37□□□□□ -0.11
PTPRA-206ENST00000430705 TRIM2Q9C040 744 aa14.37□□□□□ -0.11
PTPRA-206ENST00000430705 CENPHQ9H3R5 247 aa14.37□□□□□ -0.11
PTPRA-206ENST00000430705 CXorf56Q9H5V9 222 aa14.37□□□□□ -0.11
PTPRA-206ENST00000430705 WDR55Q9H6Y2 383 aaPredicted RBP14.37□□□□□ -0.11
PTPRA-206ENST00000430705 KCNK9Q9NPC2 374 aa14.37□□□□□ -0.11
PTPRA-206ENST00000430705 FAM171A2A8MVW0 826 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 SHISA9B4DS77 424 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 SULT2B1O00204 365 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 TMCC2O75069 709 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 PGM3O95394 542 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 PMS2P2O95744 297 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 IGHV3-9P01782 118 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 GSNP06396 782 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 CD3EP07766 207 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 EPHA3P29320 983 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 CHI3L1P36222 383 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-206ENST00000430705 CDKN1AP38936 164 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 APOBEC1P41238 236 aaKnown RBP14.36□□□□□ -0.11
PTPRA-206ENST00000430705 MVDP53602 400 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 RPS4XP62701 263 aaKnown RBP14.36□□□□□ -0.11
PTPRA-206ENST00000430705 KCNJ10P78508 379 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 STK11Q15831 433 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 GPAT3Q53EU6 434 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 GRINAQ7Z429 371 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 GALNT5Q7Z7M9 940 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 MTDHQ86UE4 582 aaKnown RBP14.36□□□□□ -0.11
PTPRA-206ENST00000430705 ZNF433Q8N7K0 673 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-206ENST00000430705 ANKRD42Q8N9B4 389 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 PNPT1Q8TCS8 783 aaKnown RBP14.36□□□□□ -0.11
PTPRA-206ENST00000430705 FBXW5Q969U6 566 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 ESRP2Q9H6T0 727 aaKnown RBP14.36□□□□□ -0.11
PTPRA-206ENST00000430705 SERINC1Q9NRX5 453 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 CR1P17927 2039 aa14.36□□□□□ -0.11
PTPRA-206ENST00000430705 FBN1P35555 2871 aaKnown RBP14.36□□□□□ -0.11
PTPRA-206ENST00000430705 CADP27708 2225 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 CSPG4Q6UVK1 2322 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 GOLGA8QA0A0J9YX86 632 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 TMEM72A0PK05 275 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 GOLGA8OA6NCC3 632 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 CCDC154A6NI56 674 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 AGAP5A6NIR3 686 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 GOLGA8NF8WBI6 632 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 CD8AP01732 235 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 PGRP06401 933 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 IMPDH2P12268 514 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 PCSK6P29122 969 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 SLC16A1P53985 500 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 CSNK2A1P68400 391 aaPredicted RBP14.35□□□□□ -0.11
PTPRA-206ENST00000430705 H3F3AP84243 136 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 TNK1Q13470 666 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 PDK3Q15120 406 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 PPA1Q15181 289 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 CCDC103Q8IW40 242 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 VPS37AQ8NEZ2 397 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 ZNF563Q8TA94 476 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 TRNT1Q96Q11 434 aaKnown RBP14.35□□□□□ -0.11
PTPRA-206ENST00000430705 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.35□□□□□ -0.11
PTPRA-206ENST00000430705 OSGIN1Q9UJX0 560 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 JMJD1CQ15652 2540 aa14.35□□□□□ -0.11
PTPRA-206ENST00000430705 TMEM120BA0PK00 339 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 ZC3H12DA2A288 527 aaKnown RBP14.34□□□□□ -0.11
PTPRA-206ENST00000430705 INAFM1C9JVW0 142 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 ZNF500O60304 480 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-206ENST00000430705 NDUFS7O75251 213 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 TFPIP10646 304 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 CCNA2P20248 432 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 IDH2P48735 452 aaKnown RBP14.34□□□□□ -0.11
PTPRA-206ENST00000430705 SPOCK1Q08629 439 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 TIMM23BQ5SRD1 257 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 DNAJC14Q6Y2X3 702 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-206ENST00000430705 LRRC74BQ6ZQY2 392 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 DNM1P46Q6ZS02 220 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 ARFGAP2Q8N6H7 521 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 MAPK1IP1LQ8NDC0 245 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 SMAP2Q8WU79 429 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-206ENST00000430705 MAELQ96JY0 434 aaKnown RBP14.34□□□□□ -0.11
PTPRA-206ENST00000430705 PANX1Q96RD7 426 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 PAIP2Q9BPZ3 127 aaKnown RBP14.34□□□□□ -0.11
PTPRA-206ENST00000430705 TRAF4Q9BUZ4 470 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-206ENST00000430705 HDGFL3Q9Y3E1 203 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 DSPPQ9NZW4 1301 aa14.34□□□□□ -0.11
PTPRA-206ENST00000430705 TMED7-TICAM2A0A0A6YYA0 188 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 OR5H1A6NKK0 313 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 PDLIM1O00151 329 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 HDAC3O15379 428 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 DNPH1O43598 174 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 RAD51DO75771 328 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 IGHV4-39P01824 125 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 ITGA5P08648 1049 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 GGT1P19440 569 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 HPCAP84074 193 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 EPS8Q12929 822 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 GTDC1Q4AE62 458 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 SLC9B1Q4ZJI4 515 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 MRPL2Q5T653 305 aaKnown RBP14.33□□□□□ -0.12
PTPRA-206ENST00000430705 FBXW9Q5XUX1 488 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 SPATA19Q7Z5L4 167 aa14.33□□□□□ -0.12
PTPRA-206ENST00000430705 CMIPQ8IY22 773 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms