RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 RPP38P78345 283 aaKnown RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 OC90Q02509 493 aaPredicted RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 CRYZQ08257 329 aaKnown RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 TSPAN31Q12999 210 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 MED21Q13503 144 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 PLPPR5Q32ZL2 321 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 RFX4Q33E94 735 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 ELOA3BQ3SY89 546 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 ABHD17BQ5VST6 288 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 ZNF691Q5VV52 312 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 SLC22A10Q63ZE4 541 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 SLC30A6Q6NXT4 461 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 THSD4Q6ZMP0 1018 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 ADGRG3Q86Y34 549 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 PARP8Q8N3A8 854 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 LRRC17Q8N6Y2 441 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 PSD4Q8NDX1 1056 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 FDCSPQ8NFU4 85 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 ELOA3Q8NG57 546 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 SNIP1Q8TAD8 396 aaKnown RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 DNAJA4Q8WW22 397 aaPredicted RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 KTI12Q96EK9 354 aaPredicted RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 C1GALT1C1Q96EU7 318 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 UBL7Q96S82 380 aaPredicted RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 SECISBP2Q96T21 854 aaKnown RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 OR11A1Q9GZK7 315 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 ZNF552Q9H707 407 aaPredicted RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 CPNE5Q9HCH3 593 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 MED17Q9NVC6 651 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 TUBA8Q9NY65 449 aaPredicted RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 SELENONQ9NZV5 590 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 LRFN1Q9P244 771 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 IL20RAQ9UHF4 553 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 NDRG4Q9ULP0 352 aaKnown RBP8.05□□□□□ -1.12
SMC6-204ENST00000428868 POLHQ9Y253 713 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 TMED7Q9Y3B3 224 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 MED31Q9Y3C7 131 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 ORC6Q9Y5N6 252 aa8.05□□□□□ -1.12
SMC6-204ENST00000428868 FAM208BQ5VWN6 2430 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 TRAV27A0A087WT01 109 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 UNC119BA6NIH7 251 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 ZAR1LA6NP61 321 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 SUSD5O60279 629 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 CH25HO95992 272 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 RFPL3SP0C7P2 107 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 FPR3P25089 353 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 ELK4P28324 431 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 SHC1P29353 583 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 IFNA8P32881 189 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 GGT2P36268 569 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 RFC3P40938 356 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 RBM34P42696 430 aaKnown RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 CYB561P49447 251 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 POLR2HP52434 150 aaKnown RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 MLLT10P55197 1068 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 SUMO3P55854 103 aaPredicted RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 CTBP2P56545 445 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 SOX8P57073 446 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 CD47Q08722 323 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 C19orf57Q0VDD7 668 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 DBPQ10586 325 aaPredicted RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 SNTA1Q13424 505 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 PTGES3Q15185 160 aaKnown RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 OR1C1Q15619 314 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 SWT1Q5T5J6 900 aaKnown RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 ACSM5Q6NUN0 579 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 TTC33Q6PID6 262 aaPredicted RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 CD300LDQ6UXZ3 194 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 ZNF620Q6ZNG0 422 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 RASSF6Q6ZTQ3 369 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 PLCZ1Q86YW0 608 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 DND1Q8IYX4 353 aaKnown RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 LINC00471Q8N535 108 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 ZNF248Q8NDW4 579 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 MDS2Q8NDY4 140 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 ZNF555Q8NEP9 628 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 OR4K17Q8NGC6 315 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 OR4Q3Q8NH05 313 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 CNIH3Q8TBE1 160 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 APH1BQ8WW43 257 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 THAP4Q8WY91 577 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 SGCDQ92629 289 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 TAAR8Q969N4 342 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 BPIFA2Q96DR5 249 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 TMEM41AQ96HV5 264 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 MPP4Q96JB8 637 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 HRASLS5Q96KN8 279 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 SAMD8Q96LT4 415 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 JSRP1Q96MG2 331 aaPredicted RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 GNRHR2Q96P88 292 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 MOGAT1Q96PD6 335 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 CCNL2Q96S94 520 aaPredicted RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 UTP23Q9BRU9 249 aaKnown RBP8.04□□□□□ -1.12
SMC6-204ENST00000428868 PTDSS2Q9BVG9 487 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 ZNF556Q9HAH1 456 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 KLHL1Q9NR64 748 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 SACM1LQ9NTJ5 587 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 ZNF226Q9NYT6 803 aa8.04□□□□□ -1.12
SMC6-204ENST00000428868 SEC14L4Q9UDX3 406 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms