RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 TBC1D23Q9NUY8 699 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 TMED7-TICAM2A0A0A6YYA0 188 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 IGF2P01344 180 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 PRKCAP17252 672 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 FUT1P19526 365 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 APOBEC1P41238 236 aaKnown RBP13.73□□□□□ -0.21
GINS3-203ENST00000426538 CDK5Q00535 292 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 TOP3AQ13472 1001 aaPredicted RBP13.73□□□□□ -0.21
GINS3-203ENST00000426538 INPP5JQ15735 1006 aaPredicted RBP13.73□□□□□ -0.21
GINS3-203ENST00000426538 RBM48Q5RL73 367 aaKnown RBP13.73□□□□□ -0.21
GINS3-203ENST00000426538 BROXQ5VW32 411 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 SLX4IPQ5VYV7 408 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 ARSKQ6UWY0 536 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 ZNF620Q6ZNG0 422 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 PTCHD4Q6ZW05 846 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 CCDC71Q8IV32 467 aaPredicted RBP13.73□□□□□ -0.21
GINS3-203ENST00000426538 C10orf53Q8N6V4 93 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 WDSUB1Q8N9V3 476 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 OR2M3Q8NG83 312 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 OR52L1Q8NGH7 329 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 OR1J4Q8NGS1 313 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 CNIH3Q8TBE1 160 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 UBE2FQ969M7 185 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 UTP23Q9BRU9 249 aaKnown RBP13.73□□□□□ -0.21
GINS3-203ENST00000426538 PLA2G12AQ9BZM1 189 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 MED17Q9NVC6 651 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 LRFN1Q9P244 771 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 BLOC1S6Q9UL45 172 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 RNF6Q9Y252 685 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 TMED7Q9Y3B3 224 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 CDH10Q9Y6N8 788 aa13.73□□□□□ -0.21
GINS3-203ENST00000426538 FREM2Q5SZK8 3169 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 A6NL46 340 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 HCN1O60741 890 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 SMNDC1O75940 238 aaKnown RBP eCLIP13.72□□□□□ -0.21
GINS3-203ENST00000426538 CH25HO95992 272 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 SLC9A3P48764 834 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 SRSF6Q13247 344 aaKnown RBP13.72□□□□□ -0.21
GINS3-203ENST00000426538 CTU2Q2VPK5 515 aaKnown RBP13.72□□□□□ -0.21
GINS3-203ENST00000426538 CLEC12AQ5QGZ9 265 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 AGAP7PQ5VUJ5 663 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 SMARCD3Q6STE5 483 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 LINC00696Q6ZRV3 163 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 ADGRG3Q86Y34 549 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 PSD4Q8NDX1 1056 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 OR51A7Q8NH64 312 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 RHOXF1Q8NHV9 184 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 FANK1Q8TC84 345 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 FBLIM1Q8WUP2 373 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 TRUB1Q8WWH5 349 aaKnown RBP13.72□□□□□ -0.21
GINS3-203ENST00000426538 FGF11Q92914 225 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 JSRP1Q96MG2 331 aaPredicted RBP13.72□□□□□ -0.21
GINS3-203ENST00000426538 AGAP4Q96P64 663 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 SCNM1Q9BWG6 230 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 PRRG3Q9BZD7 231 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 OR52D1Q9H346 318 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 TIMMDC1Q9NPL8 285 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 TVP23BQ9NYZ1 205 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 POLHQ9Y253 713 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 DOCK10Q96BY6 2186 aa13.72□□□□□ -0.21
GINS3-203ENST00000426538 PCNX3Q9H6A9 2034 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 IGKV1D-42A0A075B6H8 117 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 ZNF891A8MT65 544 aaPredicted RBP13.71□□□□□ -0.21
GINS3-203ENST00000426538 SUSD5O60279 629 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 EEF1B2P24534 225 aaKnown RBP13.71□□□□□ -0.21
GINS3-203ENST00000426538 CD96P40200 585 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 EGR4Q05215 589 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 ZBED5Q49AG3 693 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 KCTD21Q4G0X4 260 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 CRTC2Q53ET0 693 aaPredicted RBP13.71□□□□□ -0.21
GINS3-203ENST00000426538 C12orf73Q69YU5 71 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 LSRQ86X29 649 aaPredicted RBP13.71□□□□□ -0.21
GINS3-203ENST00000426538 IQCF1Q8N6M8 205 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 FADS6Q8N9I5 356 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 BPIFB6Q8NFQ5 453 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 OR2T33Q8NG76 320 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 OR13C2Q8NGS9 318 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 MRGPRX4Q96LA9 322 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 SAMD8Q96LT4 415 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 SLC38A2Q96QD8 506 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 TNFRSF13CQ96RJ3 184 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 SLC25A19Q9HC21 320 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 PROK2Q9HC23 129 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 NANSQ9NR45 359 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 AASSQ9UDR5 926 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 IL20RAQ9UHF4 553 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 FBXL2Q9UKC9 423 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 SIGLEC7Q9Y286 467 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 ZNF337Q9Y3M9 751 aa13.71□□□□□ -0.21
GINS3-203ENST00000426538 TRAV27A0A087WT01 109 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 A8MVM7 634 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 B4DXG7 233 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 G3V3Y1 287 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 CDK2AP1O14519 115 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 PTP4A3O75365 173 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 OR7A10O76100 309 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 F10P00742 488 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 SPINK2P20155 84 aa13.7□□□□□ -0.22
GINS3-203ENST00000426538 RPS5P46782 204 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms