RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 STAMBPO95630 424 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 PMS2P2O95744 297 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 CHEK2O96017 543 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 ERCC1P07992 297 aaPredicted RBP12.79□□□□□ -0.36
PDAP1-202ENST00000426447 LINC00032P0C843 101 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 UBTFL6P0CB48 400 aaPredicted RBP12.79□□□□□ -0.36
PDAP1-202ENST00000426447 HPCAL1P37235 193 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 ACTG1P63261 375 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 SLC25A3Q00325 362 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 SKP2Q13309 424 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 VHLLQ6RSH7 139 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 ZYG11AQ6WRX3 759 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 SGMS2Q8NHU3 365 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 ACMSDQ8TDX5 336 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 OR5P2Q8WZ92 322 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 ZMYND19Q96E35 227 aaPredicted RBP12.79□□□□□ -0.36
PDAP1-202ENST00000426447 OR7D2Q96RA2 312 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 SDF2Q99470 211 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 CTPS2Q9NRF8 586 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 SLC7A10Q9NS82 523 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 PYCARDQ9ULZ3 195 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 TMED5Q9Y3A6 229 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 HDGFL3Q9Y3E1 203 aa12.79□□□□□ -0.36
PDAP1-202ENST00000426447 PDLIM1O00151 329 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 ANKRD28O15084 1053 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 CFLARO15519 480 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 SLU7O95391 586 aaKnown RBP12.78□□□□□ -0.36
PDAP1-202ENST00000426447 CRYAAP02489 173 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 OR4A8P0C604 315 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 NEFHP12036 1026 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 DAOP14920 347 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 CCNA2P20248 432 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 PCMT1P22061 227 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 FKBP2P26885 142 aaKnown RBP12.78□□□□□ -0.36
PDAP1-202ENST00000426447 MPGP29372 298 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 RYKP34925 604 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 RPL3P39023 403 aaKnown RBP12.78□□□□□ -0.36
PDAP1-202ENST00000426447 SLC16A1P53985 500 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 CKAP4Q07065 602 aaKnown RBP12.78□□□□□ -0.36
PDAP1-202ENST00000426447 LSM12Q3MHD2 195 aaKnown RBP12.78□□□□□ -0.36
PDAP1-202ENST00000426447 FAM174BQ3ZCQ3 159 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 C1QTNF12Q5T7M4 302 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 TSPO2Q5TGU0 170 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 RINLQ6ZS11 566 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 EIF3MQ7L2H7 374 aaKnown RBP12.78□□□□□ -0.36
PDAP1-202ENST00000426447 ZNF572Q7Z3I7 529 aaPredicted RBP12.78□□□□□ -0.36
PDAP1-202ENST00000426447 OR7A2PQ8NGA2 310 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 OR5D16Q8NGK9 328 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 OR2T11Q8NH01 316 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 HPS1Q92902 700 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 ARL5BQ96KC2 179 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 FCRL1Q96LA6 429 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 NAA11Q9BSU3 229 aaPredicted RBP12.78□□□□□ -0.36
PDAP1-202ENST00000426447 NMUR2Q9GZQ4 415 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 CA10Q9NS85 328 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 GPATCH2Q9NW75 528 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 CHRNA9Q9UGM1 479 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 ATP6V1HQ9UI12 483 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 SLC9A8Q9Y2E8 581 aa12.78□□□□□ -0.36
PDAP1-202ENST00000426447 A0A0A6YYJ9 748 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 VSTM5A8MXK1 200 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 TMEM114B3SHH9 223 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 SLCO1B7G3V0H7 640 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 AZIN1O14977 448 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 SCAMP2O15127 329 aaKnown RBP12.77□□□□□ -0.37
PDAP1-202ENST00000426447 KCNAB3O43448 404 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 DNPH1O43598 174 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 DNAJA2O60884 412 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 STX11O75558 287 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 SKAP2O75563 359 aaPredicted RBP12.77□□□□□ -0.37
PDAP1-202ENST00000426447 KRT33AO76009 404 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 VENTXO95231 258 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 C6orf47O95873 294 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 LAMP1P11279 417 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 BCKDHAP12694 445 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 EGR1P18146 543 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 GCAP28676 217 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 IL2RGP31785 369 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 CLK1P49759 484 aaKnown RBP12.77□□□□□ -0.37
PDAP1-202ENST00000426447 IDH3GP51553 393 aaPredicted RBP12.77□□□□□ -0.37
PDAP1-202ENST00000426447 ZNF141Q15928 474 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 LIPMQ5VYY2 423 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 UGT2A3Q6UWM9 527 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 SYT10Q6XYQ8 523 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 CCDC63Q8NA47 563 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 OR5AK3PQ8NH89 298 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 ZFAND2BQ8WV99 257 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 GCDHQ92947 438 aaPredicted RBP12.77□□□□□ -0.37
PDAP1-202ENST00000426447 MOAP1Q96BY2 351 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 SNX18Q96RF0 628 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 CCDC106Q9BWC9 280 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 OR11A1Q9GZK7 315 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 METTL17Q9H7H0 456 aaPredicted RBP12.77□□□□□ -0.37
PDAP1-202ENST00000426447 ATAD3AQ9NVI7 634 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 TMEM181Q9P2C4 612 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 FBXO9Q9UK97 447 aaPredicted RBP12.77□□□□□ -0.37
PDAP1-202ENST00000426447 MKLN1Q9UL63 735 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 PCDHB14Q9Y5E9 798 aa12.77□□□□□ -0.37
PDAP1-202ENST00000426447 IGHV1-18A0A0C4DH31 117 aa12.76□□□□□ -0.37
PDAP1-202ENST00000426447 DUXAA6NLW8 204 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms