RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 IKZF3Q9UKT9 509 aa5.09□□□□□ -1.59
HMGB1P32-201ENST00000425971 SPATA2Q9UM82 520 aa5.09□□□□□ -1.59
HMGB1P32-201ENST00000425971 ANAPC1Q9H1A4 1944 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 A0A087WZY1 265 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 A0A0U1RQV5 110 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 SDC3O75056 442 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 SCGB2A1O75556 95 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 AK1P00568 194 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 OAS1P00973 400 aaKnown RBP5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 IGLV3-19P01714 112 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 LIPCP11150 499 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 NCF1P14598 390 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 EMC2Q15006 297 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 SIX1Q15475 284 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 HSP90AA5PQ58FG0 334 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 TCHHL1Q5QJ38 904 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 GFI1BQ5VTD9 330 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 CCDC71Q8IV32 467 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 MISPQ8IVT2 679 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 ARFGAP2Q8N6H7 521 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 WDR36Q8NI36 951 aaKnown RBP5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 CRYGNQ8WXF5 182 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 NR4A3Q92570 626 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 ANKRD27Q96NW4 1050 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 C19orf43Q9BQ61 176 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 CCDC28BQ9BUN5 200 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 ST6GALNAC5Q9BVH7 336 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 NUP58Q9BVL2 599 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 DHX33Q9H6R0 707 aaKnown RBP5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 COQ10BQ9H8M1 238 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 NRN1Q9NPD7 142 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 GCNT4Q9P109 453 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 P2RX2Q9UBL9 471 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 EIF3KQ9UBQ5 218 aaKnown RBP5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 SH3BGRL2Q9UJC5 107 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 BLOC1S6Q9UL45 172 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 FOXJ3Q9UPW0 622 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 TP53TG5Q9Y2B4 290 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 AP1M2Q9Y6Q5 423 aa5.08□□□□□ -1.6
HMGB1P32-201ENST00000425971 IGHV3OR16-10A0A075B7F0 116 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 TRAV19A0A0A6YYK7 116 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 SMIM28A0A1B0GU29 152 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 TCP11X1B4DZS4 312 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 VPS26AO75436 327 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 SORBS2O94875 1100 aaKnown RBP5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 CALM1P0DP23 149 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 CALM2P0DP24 149 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 CALM3P0DP25 149 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 RRASP10301 218 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 CD99P14209 185 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 OXTRP30559 389 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 DEKP35659 375 aaKnown RBP5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 PGFP49763 221 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 ATP4BP51164 291 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 MTTPP55157 894 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 KRTAP10-9P60411 292 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 KLHL30Q0D2K2 578 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 PARP6Q2NL67 630 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 AGAP7PQ5VUJ5 663 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 SDHAF4Q5VUM1 108 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 AFTPHQ6ULP2 937 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 ATRAIDQ6UW56 229 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 RNF130Q86XS8 419 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 PHC2Q8IXK0 858 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 TAF15Q92804 592 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 C18orf25Q96B23 403 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 SLC35D1Q9NTN3 355 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 CTSZQ9UBR2 303 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 RARRES3Q9UL19 164 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 EMCNQ9ULC0 261 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 RNF115Q9Y4L5 304 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 VPS13CQ709C8 3753 aa5.07□□□□□ -1.6
HMGB1P32-201ENST00000425971 KMT2CQ8NEZ4 4911 aaKnown RBP5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 RNF212BA8MTL3 300 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 CYB561D2O14569 222 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 NDC80O14777 642 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 MSH4O15457 936 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 YKT6O15498 198 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 CFLARO15519 480 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 NOL3O60936 208 aaKnown RBP5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 TOXO94900 526 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 IGHV4-34P06331 123 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 HCKP08631 526 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 ZNF10P21506 573 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 UCP1P25874 307 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 ARRB1P49407 418 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 HSD17B7P56937 341 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 HERVK_113P63132 956 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 ERVK-8P63133 956 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 PRR30Q53SZ7 412 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 FAAP20Q6NZ36 180 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 VPS36Q86VN1 386 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 SAMD12Q8N8I0 201 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 OR10T2Q8NGX3 314 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 MIPOL1Q8TD10 442 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 SYAP1Q96A49 352 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 PKNOX2Q96KN3 472 aa5.06□□□□□ -1.6
HMGB1P32-201ENST00000425971 CEP170P1Q96L14 293 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms