RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ATE1O95260 518 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 GKN3PP0CG01 181 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 CCNA2P20248 432 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 SLC1A3P43003 542 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 CRISP3P54108 245 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 RASGEF1BQ0VAM2 473 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 AGKQ53H12 422 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 FBXW10Q5XX13 1052 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 PAMR1Q6UXH9 720 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 MTDHQ86UE4 582 aaKnown RBP16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 SLC25A43Q8WUT9 341 aaPredicted RBP16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZC3HAV1LQ96H79 300 aaKnown RBP16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 HS3ST6Q96QI5 342 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZNF300Q96RE9 604 aaPredicted RBP16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 FOXC2Q99958 501 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 BCL2L10Q9HD36 194 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 A4GALTQ9NPC4 353 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 TMEM45AQ9NWC5 275 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 THUMPD1Q9NXG2 353 aaKnown RBP16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZNF226Q9NYT6 803 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 CALML5Q9NZT1 146 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 GMEB1Q9Y692 573 aa16.29■□□□□ 0.2
SMARCAL1-205ENST00000425815 TMED7-TICAM2A0A0A6YYA0 188 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 A0A0G2JPF8 293 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 HNRNPCL2B2RXH8 293 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 HNRNPCL3B7ZW38 293 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 HNRNPCL1O60812 293 aaKnown RBP16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 FESP07332 822 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 HNRNPCL4P0DMR1 293 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 TFPIP10646 304 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 PSMB1P20618 241 aaKnown RBP16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 TACR3P29371 465 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 NTF4P34130 210 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 GNA13Q14344 377 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 SQLEQ14534 574 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 TSC22D1Q15714 1073 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 LIN52Q52LA3 116 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 DLEU7Q6UYE1 221 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 CXorf67Q86X51 503 aaPredicted RBP16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 MBD6Q96DN6 1003 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 IKZF5Q9H5V7 419 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 KLHL9Q9P2J3 617 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZNF443Q9Y2A4 671 aaPredicted RBP16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 GPR52Q9Y2T5 361 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 TMED7Q9Y3B3 224 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 HDGFL3Q9Y3E1 203 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 VPS13CQ709C8 3753 aa16.28■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZC3H12DA2A288 527 aaKnown RBP16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 ZNF724A8MTY0 619 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 RAMP1O60894 148 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 PMS2P2O95744 297 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 THBS1P07996 1170 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 IMPDH2P12268 514 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 PRG2P13727 222 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 DNASE1P24855 282 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 FKBP2P26885 142 aaKnown RBP16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 HTR3AP46098 478 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 CLK1P49759 484 aaKnown RBP16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 POLR2HP52434 150 aaKnown RBP16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 CSNK2A1P68400 391 aaPredicted RBP16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 H3F3AP84243 136 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 FADDQ13158 208 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 ABLIM2Q6H8Q1 611 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 CCDC103Q8IW40 242 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 PIK3IP1Q96FE7 263 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 PRSS50Q9UI38 385 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 DCTN4Q9UJW0 460 aa16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 SPIN1Q9Y657 262 aaPredicted RBP16.27■□□□□ 0.2
SMARCAL1-205ENST00000425815 IGKV3D-15A0A087WSY6 115 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 UQCRHLA0A096LP55 91 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 A0A1W2PP18 115 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 ZNF716A6NP11 495 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 ZNF208O43345 1280 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 PGM3O95394 542 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 ADAP00813 363 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 RAF1P04049 648 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 PPP3CBP16298 524 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 CD53P19397 219 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 OR3A2P47893 321 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 IRX1P78414 480 aaPredicted RBP16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 PDK3Q15120 406 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 SFRP5Q5T4F7 317 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 RNF220Q5VTB9 566 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 PRAMEF8Q5VWM4 474 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 PRAMEF7Q5VXH5 474 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 STK32CQ86UX6 486 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 ZNF440Q8IYI8 595 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 SPATA9Q9BWV2 254 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 ACTR6Q9GZN1 396 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 OR10A4Q9H209 315 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 NPHS2Q9NP85 383 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 TRAPPC4Q9Y296 219 aa16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 ZNF469Q96JG9 3925 aaPredicted RBP16.26■□□□□ 0.19
SMARCAL1-205ENST00000425815 AKAP6Q13023 2319 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 ABCA4P78363 2273 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 NCF2P19878 526 aaPredicted RBP16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 LARS2Q15031 903 aaKnown RBP16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 ADRM1Q16186 407 aa16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.25■□□□□ 0.19
SMARCAL1-205ENST00000425815 SERPINA11Q86U17 422 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms