RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 DCST1Q5T197 706 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ATG4DQ86TL0 474 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 MISPQ8IVT2 679 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 GPALPP1Q8IXQ4 340 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 LSMEM1Q8N8F7 131 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ELOA3Q8NG57 546 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 NTNG2Q96CW9 530 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF347Q96SE7 839 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 FEVQ99581 238 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 BDH2Q9BUT1 245 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 RNF32Q9H0A6 362 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 UBQLN3Q9H347 655 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 PRORYQ9H606 182 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF337Q9Y3M9 751 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 TMED7-TICAM2A0A0A6YYA0 188 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 TRAV17A0A0B4J275 112 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 OR2M5A3KFT3 312 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 ADAMDEC1O15204 470 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 SEC14L5O43304 696 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 GASTP01350 101 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 POLR2IP36954 125 aaKnown RBP12.15□□□□□ -0.46
PRPF39-202ENST00000424478 ALDH6A1Q02252 535 aaKnown RBP12.15□□□□□ -0.46
PRPF39-202ENST00000424478 CRYZQ08257 329 aaKnown RBP12.15□□□□□ -0.46
PRPF39-202ENST00000424478 ULK3Q6PHR2 472 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 KLHL17Q6TDP4 642 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 Q6ZPB1 254 aaPredicted RBP12.15□□□□□ -0.46
PRPF39-202ENST00000424478 TMEM178AQ8NBL3 297 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 AQP11Q8NBQ7 271 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 BOKQ9UMX3 212 aaPredicted RBP12.15□□□□□ -0.46
PRPF39-202ENST00000424478 TMED7Q9Y3B3 224 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 KLRC4-KLRK1H3BQV0 150 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 SUSD5O60279 629 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 CBR3O75828 277 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 OR5F1O95221 314 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 SOX14O95416 240 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 CXCR1P25024 350 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 LIMS1P48059 325 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 TRAM2Q15035 370 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 OR10G2Q8NGC3 310 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 C9orf43Q8TAL5 461 aaPredicted RBP12.15□□□□□ -0.46
PRPF39-202ENST00000424478 B3GNT3Q9Y2A9 372 aa12.15□□□□□ -0.46
PRPF39-202ENST00000424478 SH3PXD2BA1X283 911 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 CDC42EP2O14613 210 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 CHP2O43745 196 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 TFPIP10646 304 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 MAKP20794 623 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 SLC6A8P48029 635 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 CLDN20P56880 219 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 SRYQ05066 204 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 ZER1Q7Z7L7 766 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 ZGRF1Q86YA3 2104 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 ZNF440Q8IYI8 595 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 C10orf53Q8N6V4 93 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 SNRNP27Q8WVK2 155 aaKnown RBP12.14□□□□□ -0.47
PRPF39-202ENST00000424478 TMEM239Q8WW34 195 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 SLC38A4Q969I6 547 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 SLC25A36Q96CQ1 311 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 MOGAT1Q96PD6 335 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 SELENONQ9NZV5 590 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 C6orf203Q9P0P8 240 aaPredicted RBP12.14□□□□□ -0.47
PRPF39-202ENST00000424478 COL12A1Q99715 3063 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 IGLV3-32A0A0A0MS00 114 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 NPIPA5E9PKD4 350 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 FCGR1AP12314 374 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 EPHA2P29317 976 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 DNAJA1P31689 397 aaKnown RBP12.14□□□□□ -0.47
PRPF39-202ENST00000424478 DAPP51397 102 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 TMEM81Q6P7N7 255 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 ZNF613Q6PF04 617 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 ZDHHC13Q8IUH4 622 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 ATG16L2Q8NAA4 619 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 FUZQ9BT04 418 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 ADAM19Q9H013 955 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 NPIPA1Q9UND3 350 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 A0A1W2PRQ8 180 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 IFI30P13284 250 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 DSCR4P56555 118 aaPredicted RBP12.14□□□□□ -0.47
PRPF39-202ENST00000424478 DGCR6Q14129 220 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 PPP4R4Q6NUP7 873 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 Q6ZS92 163 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 ZBTB49Q6ZSB9 765 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
PRPF39-202ENST00000424478 Q8NA96 180 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 ZFP62Q8NB50 900 aaPredicted RBP12.14□□□□□ -0.47
PRPF39-202ENST00000424478 TMCC3Q9ULS5 477 aa12.14□□□□□ -0.47
PRPF39-202ENST00000424478 CHD6Q8TD26 2715 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 A0A087WUJ7 227 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 ENO4A6NNW6 628 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 TFECO14948 347 aaPredicted RBP12.13□□□□□ -0.47
PRPF39-202ENST00000424478 CCNB2O95067 398 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 CH25HO95992 272 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 UQCRBP14927 111 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 ZNF24P17028 368 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 FPR1P21462 350 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 SNCBQ16143 134 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 MICAQ29983 383 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 PCSK4Q6UW60 755 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
PRPF39-202ENST00000424478 GRINAQ7Z429 371 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms