RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PSD2Q9BQI7 771 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 NSRP1Q9H0G5 558 aaKnown RBP13.5□□□□□ -0.25
USB1-202ENST00000423271 GSX1Q9H4S2 264 aaPredicted RBP13.5□□□□□ -0.25
USB1-202ENST00000423271 POLE3Q9NRF9 147 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 ACER3Q9NUN7 267 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 SLC35A3Q9Y2D2 325 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 A0A096LPI6 279 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 A0A1W2PP18 115 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 PLAUP00749 431 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 YES1P07947 543 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 CHRM4P08173 479 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 HOXB9P17482 250 aaPredicted RBP13.49□□□□□ -0.25
USB1-202ENST00000423271 EDNRAP25101 427 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 RYKP34925 604 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 NKX6-1P78426 367 aaPredicted RBP13.49□□□□□ -0.25
USB1-202ENST00000423271 HPCAP84074 193 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 KLF10Q13118 480 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 COX20Q5RI15 118 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 AP1ARQ63HQ0 302 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 ALKBH2Q6NS38 261 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 CPLX4Q7Z7G2 160 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 OIT3Q8WWZ8 545 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 TMEM234Q8WY98 164 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 CNOT9Q92600 299 aaKnown RBP13.49□□□□□ -0.25
USB1-202ENST00000423271 S100PBPQ96BU1 408 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 DNAJA3Q96EY1 480 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 ZNF300Q96RE9 604 aaPredicted RBP13.49□□□□□ -0.25
USB1-202ENST00000423271 CCL19Q99731 98 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 CCDC106Q9BWC9 280 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 SLC38A1Q9H2H9 487 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 BCO1Q9HAY6 547 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 GP6Q9HCN6 339 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 FANCFQ9NPI8 374 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 CTPS2Q9NRF8 586 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 SLAMF8Q9P0V8 285 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 GPR52Q9Y2T5 361 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 PCDHB14Q9Y5E9 798 aa13.49□□□□□ -0.25
USB1-202ENST00000423271 ZNF814B7Z6K7 855 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 AP3D1O14617 1153 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 SNX3O60493 162 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 CYTIPO60759 359 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 FESP07332 822 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 DIO1P49895 249 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 MVDP53602 400 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 KCNJ10P78508 379 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 SYT14P1Q58G82 188 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 LRIF1Q5T3J3 769 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 ZNF704Q6ZNC4 412 aaPredicted RBP13.48□□□□□ -0.25
USB1-202ENST00000423271 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.48□□□□□ -0.25
USB1-202ENST00000423271 RETREG3Q86VR2 466 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 MSRB3Q8IXL7 192 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 SLC43A2Q8N370 569 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 ZNF563Q8TA94 476 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 ZNF775Q96BV0 537 aaPredicted RBP13.48□□□□□ -0.25
USB1-202ENST00000423271 PLPPR2Q96GM1 343 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 OR10A4Q9H209 315 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 TPT1P8Q9HAU6 139 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 SERINC1Q9NRX5 453 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 SLC25A37Q9NYZ2 338 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 KLHL9Q9P2J3 617 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 PRSS50Q9UI38 385 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 LEF1Q9UJU2 399 aaPredicted RBP13.48□□□□□ -0.25
USB1-202ENST00000423271 NDUFAF1Q9Y375 327 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 USF3Q68DE3 2245 aa13.48□□□□□ -0.25
USB1-202ENST00000423271 NIPBLQ6KC79 2804 aaeCLIP13.48□□□□□ -0.25
USB1-202ENST00000423271 NAV3Q8IVL0 2385 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 CADP27708 2225 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 ANGPT2O15123 496 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 SMPD2O60906 423 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 KRT75O95678 551 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 ADAP00813 363 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 TFPIP10646 304 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 FPR1P21462 350 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 RASGEF1BQ0VAM2 473 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 MAPK11Q15759 364 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 Q5PR19 223 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 SFRP5Q5T4F7 317 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 ABLIM2Q6H8Q1 611 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 C20orf204Q6ZNR8 217 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 TMPPEQ6ZT21 453 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 STEAP2Q8NFT2 490 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 TSPEARQ8WU66 669 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 PIGTQ969N2 578 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 ARL5BQ96KC2 179 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 TRNT1Q96Q11 434 aaKnown RBP13.47□□□□□ -0.25
USB1-202ENST00000423271 PIP5K1AQ99755 562 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 OR11A1Q9GZK7 315 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 EXOSC3Q9NQT5 275 aaKnown RBP13.47□□□□□ -0.25
USB1-202ENST00000423271 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.47□□□□□ -0.25
USB1-202ENST00000423271 MRGBPQ9NV56 204 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 ARMCX1Q9P291 453 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 CAPN7Q9Y6W3 813 aa13.47□□□□□ -0.25
USB1-202ENST00000423271 ANK3Q12955 4377 aaKnown RBP13.46□□□□□ -0.25
USB1-202ENST00000423271 TRBV5-3A0A0A0MS03 114 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 AGAP5A6NIR3 686 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 SULT2B1O00204 365 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 FBP2O00757 339 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 CCDC22O60826 627 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 ETFAP13804 333 aa13.46□□□□□ -0.25
USB1-202ENST00000423271 FOSL1P15407 271 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms