RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 GABRB1P18505 474 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 ITPKBP27987 946 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 GP2P55259 537 aaKnown RBP8.15□□□□□ -1.1
HPS4-204ENST00000422379 SH3BGRP55822 239 aaPredicted RBP8.15□□□□□ -1.1
HPS4-204ENST00000422379 SOX8P57073 446 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 PSPHP78330 225 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 ROR2Q01974 943 aaKnown RBP8.15□□□□□ -1.1
HPS4-204ENST00000422379 EMX1Q04741 257 aaPredicted RBP8.15□□□□□ -1.1
HPS4-204ENST00000422379 TUBA3CQ13748 450 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 PTGES3Q15185 160 aaKnown RBP8.15□□□□□ -1.1
HPS4-204ENST00000422379 TMEM236Q5W0B7 351 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 PGBD2Q6P3X8 592 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 TUBA3EQ6PEY2 450 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 PODNL1Q6PEZ8 512 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 OPN5Q6U736 354 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 AHSA2Q719I0 299 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 ERI1Q8IV48 349 aaKnown RBP8.15□□□□□ -1.1
HPS4-204ENST00000422379 P3H2Q8IVL5 708 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 TMEM156Q8N614 296 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 WDSUB1Q8N9V3 476 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 ZNF527Q8NB42 609 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 CLEC1AQ8NC01 280 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 ZNF540Q8NDQ6 660 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 FDCSPQ8NFU4 85 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 RHOXF1Q8NHV9 184 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 TMEM255BQ8WV15 326 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 FAR1Q8WVX9 515 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 COG8Q96MW5 612 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 FNDC11Q9BVV2 318 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 DGCR6LQ9BY27 220 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 UCK2Q9BZX2 261 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 KLHL28Q9NXS3 571 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 GPR83Q9NYM4 423 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 ZNF226Q9NYT6 803 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 STMN3Q9NZ72 180 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 MED11Q9P086 117 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 REV1Q9UBZ9 1251 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 ENOPH1Q9UHY7 261 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 FBXL2Q9UKC9 423 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 SLC7A7Q9UM01 511 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 MGAT4BQ9UQ53 548 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 SLC35A3Q9Y2D2 325 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 PCDHGB1Q9Y5G3 927 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 KCNMB2Q9Y691 235 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 MED12Q93074 2177 aa8.15□□□□□ -1.1
HPS4-204ENST00000422379 ACACBO00763 2458 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 A0A087WUU8 490 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 A0A0B4J2E0 115 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 A0A1B0GX12 115 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 MED19A0JLT2 244 aaPredicted RBP8.15□□□□□ -1.11
HPS4-204ENST00000422379 ZNF891A8MT65 544 aaPredicted RBP8.15□□□□□ -1.11
HPS4-204ENST00000422379 C1QTNF9BB2RNN3 333 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 SHISA8B8ZZ34 492 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 RGS10O43665 173 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 PIP5K1CO60331 668 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 INMTO95050 263 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 ATE1O95260 518 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 SOX14O95416 240 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 MT-ND2P03891 347 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 C1QTNF9P0C862 333 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 MAP2K4P45985 399 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 MASP1P48740 699 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 CD97P48960 835 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 CCR4P51679 360 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 CRISP1P54107 249 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 UGT2B15P54855 530 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 TAS2R41P59536 307 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 TLE3Q04726 772 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 COL28A1Q2UY09 1125 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 CRTC2Q53ET0 693 aaPredicted RBP8.15□□□□□ -1.11
HPS4-204ENST00000422379 ARSKQ6UWY0 536 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 PLEKHM3Q6ZWE6 761 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 CYP4Z2PQ8N1L4 340 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 DEPDC4Q8N2C3 294 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 TMCO5AQ8N6Q1 288 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 LSMEM1Q8N8F7 131 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 OIT3Q8WWZ8 545 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 C3orf49Q96BT1 292 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 TMCO6Q96DC7 493 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 SLC41A3Q96GZ6 507 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 FRMD6Q96NE9 622 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 SIGLEC11Q96RL6 698 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 LAT2Q9GZY6 243 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 CPNE5Q9HCH3 593 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 CCNB1IP1Q9NPC3 277 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 EXOSC3Q9NQT5 275 aaKnown RBP8.15□□□□□ -1.11
HPS4-204ENST00000422379 HPF1Q9NWY4 346 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 IMPAD1Q9NX62 359 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 KLRF1Q9NZS2 232 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 DKK4Q9UBT3 224 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 TESQ9UGI8 421 aaKnown RBP8.15□□□□□ -1.11
HPS4-204ENST00000422379 RAXQ9Y2V3 346 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 WIF1Q9Y5W5 379 aa8.15□□□□□ -1.11
HPS4-204ENST00000422379 IGKV1D-42A0A075B6H8 117 aa8.14□□□□□ -1.11
HPS4-204ENST00000422379 IGLV3-32A0A0A0MS00 114 aa8.14□□□□□ -1.11
HPS4-204ENST00000422379 GTPBP1O00178 669 aaKnown RBP8.14□□□□□ -1.11
HPS4-204ENST00000422379 GNB5O14775 395 aa8.14□□□□□ -1.11
HPS4-204ENST00000422379 CDC40O60508 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
HPS4-204ENST00000422379 FMO6PO60774 539 aa8.14□□□□□ -1.11
HPS4-204ENST00000422379 OR5F1O95221 314 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms