RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 CDK20Q8IZL9 346 aa19.51■□□□□ 0.71
ABCF3-202ENST00000421340 ATG16L2Q8NAA4 619 aa19.51■□□□□ 0.71
ABCF3-202ENST00000421340 AQP11Q8NBQ7 271 aa19.51■□□□□ 0.71
ABCF3-202ENST00000421340 FAM98AQ8NCA5 519 aaKnown RBP19.51■□□□□ 0.71
ABCF3-202ENST00000421340 GNPDA2Q8TDQ7 276 aa19.51■□□□□ 0.71
ABCF3-202ENST00000421340 STK35Q8TDR2 534 aa19.51■□□□□ 0.71
ABCF3-202ENST00000421340 OR2B2Q9GZK3 357 aa19.51■□□□□ 0.71
ABCF3-202ENST00000421340 ZNF556Q9HAH1 456 aa19.51■□□□□ 0.71
ABCF3-202ENST00000421340 SMURF2Q9HAU4 748 aa19.51■□□□□ 0.71
ABCF3-202ENST00000421340 DKKL1Q9UK85 242 aa19.51■□□□□ 0.71
ABCF3-202ENST00000421340 FREM2Q5SZK8 3169 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 A8MVM7 634 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 LINC01387J3KSC0 135 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 HPNP05981 417 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 RFPL3SP0C7P2 107 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 GSTM3P21266 225 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 ELK4P28324 431 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 OMPP47874 163 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 CLK1P49759 484 aaKnown RBP19.5■□□□□ 0.71
ABCF3-202ENST00000421340 FOXF1Q12946 379 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 FOXD4Q12950 439 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-202ENST00000421340 KCNAB2Q13303 367 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 TMPRSS11FQ6ZWK6 438 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 NRMQ8IXM6 262 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 GALNT4Q8N4A0 578 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 OR9Q2Q8NGE9 314 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 OR6S1Q8NH40 331 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 EXTL1Q92935 676 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 ABHD17AQ96GS6 310 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 PIGQQ9BRB3 760 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 TTTY12Q9BZ98 90 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 MEPEQ9NQ76 525 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-202ENST00000421340 CHRNA9Q9UGM1 479 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 TMEFF2Q9UIK5 374 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-202ENST00000421340 SPIN1Q9Y657 262 aaPredicted RBP19.5■□□□□ 0.71
ABCF3-202ENST00000421340 ACACAQ13085 2346 aa19.5■□□□□ 0.71
ABCF3-202ENST00000421340 NCOR2Q9Y618 2525 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 IGKV1D-42A0A075B6H8 117 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 KLF4O43474 513 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 SUSD5O60279 629 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 NPIPB7O75200 414 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 GSSP48637 474 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 RAD23AP54725 363 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 ZNF169Q14929 603 aaPredicted RBP19.49■□□□□ 0.71
ABCF3-202ENST00000421340 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.49■□□□□ 0.71
ABCF3-202ENST00000421340 RPUSD3Q6P087 351 aaKnown RBP19.49■□□□□ 0.71
ABCF3-202ENST00000421340 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.49■□□□□ 0.71
ABCF3-202ENST00000421340 SLC22A16Q86VW1 577 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 PARP8Q8N3A8 854 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 ADNPQ9H2P0 1102 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 ZNF703Q9H7S9 590 aaPredicted RBP19.49■□□□□ 0.71
ABCF3-202ENST00000421340 KIF17Q9P2E2 1029 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 ENOPH1Q9UHY7 261 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 POFUT2Q9Y2G5 429 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 ORC6Q9Y5N6 252 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 CSAG2Q9Y5P2 127 aa19.49■□□□□ 0.71
ABCF3-202ENST00000421340 NINQ8N4C6 2090 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 TMEM72A0PK05 275 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 IGFBP5P24593 272 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 FPR3P25089 353 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 HSPA13P48723 471 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 CD97P48960 835 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 LSM11P83369 360 aaKnown RBP eCLIP19.48■□□□□ 0.71
ABCF3-202ENST00000421340 PLGLB1Q02325 96 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 EGR4Q05215 589 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 TSPAN31Q12999 210 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 SLC25A43Q8WUT9 341 aaPredicted RBP19.48■□□□□ 0.71
ABCF3-202ENST00000421340 LIPHQ8WWY8 451 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 BPIFA2Q96DR5 249 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 POTEKPQ9BYX7 375 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 UCK2Q9BZX2 261 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 ACKR4Q9NPB9 350 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 PAPOLBQ9NRJ5 636 aaKnown RBP19.48■□□□□ 0.71
ABCF3-202ENST00000421340 KRT84Q9NSB2 600 aa19.48■□□□□ 0.71
ABCF3-202ENST00000421340 SMPD3Q9NY59 655 aaPredicted RBP19.48■□□□□ 0.71
ABCF3-202ENST00000421340 TRAV36DV7A0A075B6V5 113 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 ACOT7O00154 380 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 EFNA2O43921 213 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 WISP1O95388 367 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 PDGFAP04085 211 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 IFI30P13284 250 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 CDH2P19022 906 aaPredicted RBP19.47■□□□□ 0.71
ABCF3-202ENST00000421340 GDF1P27539 372 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 SELENBP1Q13228 472 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 IZUMO2Q6UXV1 221 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 FAM83FQ8NEG4 500 aaPredicted RBP19.47■□□□□ 0.71
ABCF3-202ENST00000421340 PFN4Q8NHR9 129 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 DDIT4LQ96D03 193 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 NPAS1Q99742 590 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 NIPSNAP1Q9BPW8 284 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 PRORYQ9H606 182 aa19.47■□□□□ 0.71
ABCF3-202ENST00000421340 DLGAP1O14490 977 aa19.46■□□□□ 0.71
ABCF3-202ENST00000421340 OR2T1O43869 369 aa19.46■□□□□ 0.71
ABCF3-202ENST00000421340 B3GALT5-AS1P59052 145 aa19.46■□□□□ 0.71
ABCF3-202ENST00000421340 PPIAP62937 165 aaKnown RBP19.46■□□□□ 0.71
ABCF3-202ENST00000421340 INAQ16352 499 aa19.46■□□□□ 0.71
ABCF3-202ENST00000421340 LINC00303Q3SY05 128 aa19.46■□□□□ 0.71
ABCF3-202ENST00000421340 ANKRD34AQ69YU3 496 aa19.46■□□□□ 0.71
ABCF3-202ENST00000421340 C3orf33Q6P1S2 294 aa19.46■□□□□ 0.71
ABCF3-202ENST00000421340 FAM109AQ8N4B1 249 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms