RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 RPS26P62854 115 aaKnown RBP14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 ARHGAP11BQ3KRB8 267 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 KRTAP24-1Q3LI83 254 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 C6orf136Q5SQH8 315 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 IL23RQ5VWK5 629 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 C6orf120Q7Z4R8 191 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 KRTCAP2Q8N6L1 136 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 C3orf30Q96M34 536 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 C1orf50Q9BV19 199 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 DUSP26Q9BV47 211 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 CCDC106Q9BWC9 280 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 AMBRA1Q9C0C7 1298 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 SHARPINQ9H0F6 387 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 SERHL2Q9H4I8 314 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 CHRNA9Q9UGM1 479 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 MKLN1Q9UL63 735 aa14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 SPIN1Q9Y657 262 aaPredicted RBP14.81□□□□□ -0.04
UPF3AP3-201ENST00000420996 CENPVL1A0A0U1RR11 272 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 SMIM23A6NLE4 172 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 ANKRD28O15084 1053 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 LMX1BO60663 402 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 SLU7O95391 586 aaKnown RBP14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 ITGA5P08648 1049 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 IGHV4-31P0DP07 118 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 USF1P22415 310 aaPredicted RBP14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 SOAT1P35610 550 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 CLK1P49759 484 aaKnown RBP14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 CHRNB3Q05901 458 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 WDR31Q8NA23 367 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 FNDC5Q8NAU1 212 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 FAM71CQ8NEG0 241 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 OIT3Q8WWZ8 545 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 ARL5BQ96KC2 179 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 RHOXF2Q9BQY4 288 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 C1QTNF6Q9BXI9 259 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 ZNF350Q9GZX5 532 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 FKRPQ9H9S5 495 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 CTPS2Q9NRF8 586 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 HDGFL3Q9Y3E1 203 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 PMF1-BGLAPU3KQ54 211 aa14.8□□□□□ -0.04
UPF3AP3-201ENST00000420996 PDLIM1O00151 329 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 ZNF16P17020 682 aaPredicted RBP14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 APOBEC3AP31941 199 aaPredicted RBP14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 PGM1P36871 562 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 MAGEA8P43361 318 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 FOXG1P55316 489 aaPredicted RBP14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 LSM11P83369 360 aaKnown RBP eCLIP14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 MAPK14Q16539 360 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 C1QTNF12Q5T7M4 302 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 MALRD1Q5VYJ5 2156 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 AP1ARQ63HQ0 302 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 OLIG3Q7RTU3 272 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 C16orf62Q7Z3J2 963 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 CCDC103Q8IW40 242 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 ZNF563Q8TA94 476 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 AGR3Q8TD06 166 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 EPS8L3Q8TE67 593 aaKnown RBP14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 UBLCP1Q8WVY7 318 aaPredicted RBP14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 SLC35G5Q96KT7 338 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 EXD2Q9NVH0 621 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 TRAPPC4Q9Y296 219 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 SLC35A3Q9Y2D2 325 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 ATP23Q9Y6H3 246 aa14.79□□□□□ -0.04
UPF3AP3-201ENST00000420996 GUSBP08236 651 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 GZMKP49863 264 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 H3F3AP84243 136 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 GRINAQ7Z429 371 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 ADGRG3Q86Y34 549 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 GSPT2Q8IYD1 628 aaKnown RBP14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 C17orf78Q8N4C9 275 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 C1orf162Q8NEQ5 155 aaPredicted RBP14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 MIPOL1Q8TD10 442 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 SLC17A5Q9NRA2 495 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 PARPBPQ9NWS1 579 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 MKS1Q9NXB0 559 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 DCTN4Q9UJW0 460 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 AMDHD2Q9Y303 409 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 ARFGEF3Q5TH69 2177 aa14.78□□□□□ -0.04
UPF3AP3-201ENST00000420996 RNF103-CHMP3A0A140T963 221 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 KIAA0513O60268 411 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 BCAS1O75363 584 aaPredicted RBP14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 AGR2O95994 175 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 C8BP07358 591 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 RYKP34925 604 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 CLDN8P56748 225 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 OR2B6P58173 313 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 PGS1Q32NB8 556 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 ATAD3BQ5T9A4 648 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 CLECL1Q8IZS7 167 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 CLEC4FQ8N1N0 589 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 ARIH2OSQ8N7S6 290 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 OR52E4Q8NGH9 312 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 TUBGCP3Q96CW5 907 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 DNAJA3Q96EY1 480 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 APOPT1Q96IL0 206 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 MECRQ9BV79 373 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 C19orf24Q9BVV8 132 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 OR11A1Q9GZK7 315 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 SAP130Q9H0E3 1048 aa14.77□□□□□ -0.05
UPF3AP3-201ENST00000420996 OR51I1Q9H343 314 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms