RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ZNF891A8MT65 544 aaPredicted RBP5.43□□□□□ -1.54
HMGB3-202ENST00000419110 SLC1A7O00341 560 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 DLL1O00548 723 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 GNB5O14775 395 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 TM4SF5O14894 197 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 GMFGO60234 142 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 RCBTB2O95199 551 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 LYPD3O95274 346 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 IGF2P01344 180 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 GASTP01350 101 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 IFNGP01579 166 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 THY1P04216 161 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 P04436 131 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 CCDC159P0C7I6 412 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 SMIM18P0DKX4 95 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF3P17036 446 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 BMP7P18075 431 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 F8A1P23610 371 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 EEF1B2P24534 225 aaKnown RBP5.43□□□□□ -1.54
HMGB3-202ENST00000419110 ELK4P28324 431 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 TACR3P29371 465 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 GRK5P34947 590 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 CTBP2P56545 445 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 OC90Q02509 493 aaPredicted RBP5.43□□□□□ -1.54
HMGB3-202ENST00000419110 PRKCDQ05655 676 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 CD47Q08722 323 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 FOXF1Q12946 379 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 SELENBP1Q13228 472 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 APOFQ13790 326 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 BLMHQ13867 455 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 RTP5Q14D33 572 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 RSPO4Q2I0M5 234 aaPredicted RBP5.43□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF791Q3KP31 576 aaPredicted RBP5.43□□□□□ -1.54
HMGB3-202ENST00000419110 TBC1D25Q3MII6 688 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 DCAF10Q5QP82 559 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 PRAMEF20Q5VT98 475 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 SLX4IPQ5VYV7 408 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 C12orf73Q69YU5 71 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 FCRLBQ6BAA4 426 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 C3orf33Q6P1S2 294 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 CBLN3Q6UW01 205 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 ISLR2Q6UXK2 745 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 IL20RBQ6UXL0 311 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 APOOLQ6UXV4 268 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 ZER1Q7Z7L7 766 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 ATG4DQ86TL0 474 aaPredicted RBP5.43□□□□□ -1.54
HMGB3-202ENST00000419110 VASH2Q86V25 355 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 DTX1Q86Y01 620 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 IQCF1Q8N6M8 205 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 C10orf53Q8N6V4 93 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 OR2T33Q8NG76 320 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 SLC25A43Q8WUT9 341 aaPredicted RBP5.43□□□□□ -1.54
HMGB3-202ENST00000419110 THAP4Q8WY91 577 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 GATA6Q92908 595 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 THOC3Q96J01 351 aaKnown RBP5.43□□□□□ -1.54
HMGB3-202ENST00000419110 Q96MT0 163 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 YTHDF1Q9BYJ9 559 aaKnown RBP5.43□□□□□ -1.54
HMGB3-202ENST00000419110 DPH1Q9BZG8 443 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 LHPPQ9H008 270 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 OR52D1Q9H346 318 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 DSN1Q9H410 356 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 CDCP1Q9H5V8 836 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 CPNE5Q9HCH3 593 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 TIMMDC1Q9NPL8 285 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 BATF3Q9NR55 127 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 SACM1LQ9NTJ5 587 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 SCN3BQ9NY72 215 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 B4GALT7Q9UBV7 327 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 IL17BQ9UHF5 180 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 ICAM5Q9UMF0 924 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 BAIAP2Q9UQB8 552 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 RNF6Q9Y252 685 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 POLHQ9Y253 713 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 TPRKBQ9Y3C4 175 aa5.43□□□□□ -1.54
HMGB3-202ENST00000419110 TNRC6AQ8NDV7 1962 aaKnown RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 DMXL1Q9Y485 3027 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 TRAV36DV7A0A075B6V5 113 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 TRAV27A0A087WT01 109 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 TMED7-TICAM2A0A0A6YYA0 188 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 IRGMA1A4Y4 181 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 EIF4E1BA6NMX2 242 aaKnown RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 RIIAD1A6NNX1 92 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ERVH48-1M5A8F1 160 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CDK2AP1O14519 115 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 KLF4O43474 513 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 SUSD5O60279 629 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF354AO60765 605 aaPredicted RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ADAM11O75078 769 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 OR7A10O76100 309 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 NDUFB2O95178 105 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 MT-ATP6P00846 226 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 HMGN1P05114 100 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 CCL3P10147 92 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PRKAR1AP10644 381 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ATP6V1B1P15313 513 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF17P17021 662 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PRKCAP17252 672 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 FUT4P22083 530 aa5.42□□□□□ -1.54
HMGB3-202ENST00000419110 PAICSP22234 425 aaKnown RBP5.42□□□□□ -1.54
HMGB3-202ENST00000419110 MST1P26927 711 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms