RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 DBIP07108 87 aaKnown RBP10.97□□□□□ -0.65
LIMK1-202ENST00000418310 POU3F3P20264 500 aaPredicted RBP10.97□□□□□ -0.65
LIMK1-202ENST00000418310 F8A1P23610 371 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 EDNRAP25101 427 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 THBS2P35442 1172 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 SOX2P48431 317 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 MTNR1BP49286 362 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 TRILQ7L0X0 811 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 LINGO2Q7L985 606 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 OR8K3Q8NH51 312 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 RASD2Q96D21 266 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 SERINC2Q96SA4 455 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 ERVMER34-1Q9H9K5 563 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 FKRPQ9H9S5 495 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 MED17Q9NVC6 651 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 SSNA1O43805 119 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 SLC43A1O75387 559 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 C1QBP02746 253 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 GDI2P50395 445 aaKnown RBP10.97□□□□□ -0.65
LIMK1-202ENST00000418310 TMEM44Q2T9K0 475 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 PRAMEF8Q5VWM4 474 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 PRAMEF7Q5VXH5 474 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 SDE2Q6IQ49 451 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 TCTE3Q8IZS6 198 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 OR8H3Q8N146 312 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 LNX2Q8N448 690 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 OR11H7Q8NGC8 314 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 ZNF431Q8TF32 576 aaPredicted RBP10.97□□□□□ -0.65
LIMK1-202ENST00000418310 THAP4Q8WY91 577 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 KCNJ15Q99712 375 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 CACNG6Q9BXT2 260 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 SPRTNQ9H040 489 aaPredicted RBP10.97□□□□□ -0.65
LIMK1-202ENST00000418310 ANKRD19PQ9H560 264 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 SLC22A7Q9Y694 548 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 TRBV2A0A0J9YWF9 115 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 MCIDASD6RGH6 385 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 K7EQS6 105 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 LGALS14Q8TCE9 139 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 BRIX1Q8TDN6 353 aaKnown RBP10.97□□□□□ -0.65
LIMK1-202ENST00000418310 TRIM63Q969Q1 353 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 SPACA7Q96KW9 195 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 FOXN4Q96NZ1 517 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 GAL3ST1Q99999 423 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 ZFYVE21Q9BQ24 234 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 KLHL21Q9UJP4 597 aa10.97□□□□□ -0.65
LIMK1-202ENST00000418310 C19orf53Q9UNZ5 99 aaPredicted RBP10.97□□□□□ -0.65
LIMK1-202ENST00000418310 A0A0A6YYC8 382 aaPredicted RBP10.96□□□□□ -0.65
LIMK1-202ENST00000418310 BLOC1S5-TXNDC5H3BN57 136 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 H7C1C5 153 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 I3L1I5 382 aaPredicted RBP10.96□□□□□ -0.65
LIMK1-202ENST00000418310 SEC14L5O43304 696 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 CHP2O43745 196 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 DHFRP00374 187 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 AHCYP23526 432 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 SLC6A1P30531 599 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 LCN6P62502 163 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 ERVK-25P63136 954 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 ITPRIPL2Q3MIP1 535 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 CEP78Q5JTW2 689 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 NUDT18Q6ZVK8 323 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 ZNF655Q8N720 491 aaPredicted RBP10.96□□□□□ -0.65
LIMK1-202ENST00000418310 SP7Q8TDD2 431 aaPredicted RBP10.96□□□□□ -0.65
LIMK1-202ENST00000418310 HERVK_113Q902F9 699 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 C1QTNF7Q9BXJ2 289 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 SLC35A3Q9Y2D2 325 aa10.96□□□□□ -0.65
LIMK1-202ENST00000418310 J3QRE1 110 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 SCO1O75880 301 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 HLA-DQB1P01920 261 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 ANKRD34CP0C6C1 535 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 HK1P19367 917 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 ABHD13Q7L211 337 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 CSNK1A1LQ8N752 337 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 CDRT4Q8N9R6 151 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 GALNT6Q8NCL4 622 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 OR7G1Q8NGA0 311 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 OR11H4Q8NGC9 324 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 LMF1Q96S06 567 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 RPS6KB2Q9UBS0 482 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 CFAP54Q96N23 3096 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 MPDZO75970 2070 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 A0A0G2JK05 382 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 TCRBP04435 133 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 WNT1P04628 370 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 BTCP35070 178 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 FGFBP1Q14512 234 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 ZNF267Q14586 743 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-202ENST00000418310 C9orf50Q5SZB4 431 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 GARNL3Q5VVW2 1013 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 METAP1DQ6UB28 335 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-202ENST00000418310 UBE2Q1Q7Z7E8 422 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 ZNF687Q8N1G0 1237 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 C17orf50Q8WW18 174 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 PGLYRP3Q96LB9 341 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 HSPA12BQ96MM6 686 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 TSPAN10Q9H1Z9 355 aaPredicted RBP10.96□□□□□ -0.66
LIMK1-202ENST00000418310 DPAGT1Q9H3H5 408 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 SFXN1Q9H9B4 322 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 POT1Q9NUX5 634 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 COPS3Q9UNS2 423 aa10.96□□□□□ -0.66
LIMK1-202ENST00000418310 SPACA6W5XKT8 324 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms