RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 GAREM2Q75VX8 874 aa10.49□□□□□ -0.73
PTCH1-205ENST00000418258 HAVCR2Q8TDQ0 301 aa10.49□□□□□ -0.73
PTCH1-205ENST00000418258 HSD17B8Q92506 261 aa10.49□□□□□ -0.73
PTCH1-205ENST00000418258 CNOT9Q92600 299 aaKnown RBP10.49□□□□□ -0.73
PTCH1-205ENST00000418258 PGAP3Q96FM1 320 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-205ENST00000418258 SLC41A2Q96JW4 573 aa10.49□□□□□ -0.73
PTCH1-205ENST00000418258 PFDN5Q99471 154 aa10.49□□□□□ -0.73
PTCH1-205ENST00000418258 DPCDQ9BVM2 203 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-205ENST00000418258 PADI1Q9ULC6 663 aa10.49□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF587BE7ETH6 402 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 TACR3P29371 465 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 OR1D5P58170 312 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF169Q14929 603 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 TMEM244Q5VVB8 128 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ZC3H3Q8IXZ2 948 aaKnown RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 OR6F1Q8NGZ6 308 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 TRUB1Q8WWH5 349 aaKnown RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 PRRC1Q96M27 445 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF587Q96SQ5 575 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ACPTQ9BZG2 426 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 SCN2AQ99250 2005 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 IGKV6D-21A0A0A0MT36 114 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 LRRC30A6NM36 301 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 UBFD1O14562 309 aaKnown RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 SLC22A5O76082 557 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 F13BP05160 661 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ALDH3B1P43353 468 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 HOXA1P49639 335 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 SPOCK1Q08629 439 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 RDH10Q8IZV5 341 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 STEAP2Q8NFT2 490 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 FNDC9Q8TBE3 224 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF578Q96N58 590 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ADAMTS6Q9UKP5 1117 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 IGKV6-21A0A0C4DH24 114 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 E7ESA3 106 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 GJB3O75712 270 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 CAPNS1P04632 268 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 TPOP07202 933 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 MYOGP15173 224 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 HOXD9P28356 352 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 GABARAPL2P60520 117 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF322Q6U7Q0 402 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 PRICKLE2Q7Z3G6 844 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 CD163Q86VB7 1156 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 NICN1Q9BSH3 213 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 SPHK1Q9NYA1 384 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 MRPS2Q9Y399 296 aaKnown RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 TMEM269A0A1B0GVZ9 245 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 PAHP00439 452 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 IL1AP01583 271 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 SLC10A1Q14973 349 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 MRPL2Q5T653 305 aaKnown RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 PRSS48Q7RTY5 328 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 A0A1W2PPH5 198 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 KLRC4-KLRK1H3BQV0 150 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 BET1O15155 118 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 PIP5K1CO60331 668 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 AKAIN1P0CW23 69 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 CTSCP53634 463 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 TCEAL1Q15170 157 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 DPY19L2P1Q6NXN4 242 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 RANBP10Q6VN20 620 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF597Q96LX8 424 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 SEMA6CQ9H3T2 930 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ASF1BQ9NVP2 202 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 IL17CQ9P0M4 197 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 HCSTQ9UBK5 93 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 C17orf113A0A1B0GUU1 675 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF254O75437 659 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 GPR75O95800 540 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 WNT11O96014 354 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 TRA2BP62995 288 aaKnown RBP10.48□□□□□ -0.73
PTCH1-205ENST00000418258 IL13RA1P78552 427 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 NDUFAF7Q7L592 441 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 AAED1Q7RTV5 226 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 DNAJC22Q8N4W6 341 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 OR14A2Q96R54 314 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 C1orf198Q9H425 327 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 ACKR4Q9NPB9 350 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 SPAG17Q6Q759 2223 aa10.48□□□□□ -0.73
PTCH1-205ENST00000418258 RNF212BA8MTL3 300 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 NOTOA8MTQ0 251 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 MAOAP21397 527 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 IKZF1Q13422 519 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 CDONQ4KMG0 1287 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 PDLIM3Q53GG5 364 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-205ENST00000418258 SCCPDHQ8NBX0 429 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ADAMTS16Q8TE57 1224 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ZFPM2Q8WW38 1151 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 FOXRED1Q96CU9 486 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-205ENST00000418258 ATP13A2Q9NQ11 1180 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 C19orf12Q9NSK7 152 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 PKLRP30613 574 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 AHRP35869 848 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 HTR6P50406 440 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 BMXP51813 675 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 MTCP1P56278 107 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 TOX2Q96NM4 488 aa10.47□□□□□ -0.73
PTCH1-205ENST00000418258 SAGE1Q9NXZ1 904 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms