RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 CXXC5Q7LFL8 322 aaKnown RBP17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 LRRC17Q8N6Y2 441 aa17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 ELOA3Q8NG57 546 aa17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 OR8K3Q8NH51 312 aa17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 C8orf44Q96CB5 159 aa17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 SH3YL1Q96HL8 342 aaPredicted RBP17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 OPALINQ96PE5 141 aa17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 MND1Q9BWT6 205 aa17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 TBL1XR1Q9BZK7 514 aa17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 SLC24A3Q9HC58 644 aa17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 ZBTB20Q9HC78 741 aaPredicted RBP17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 SLC39A1Q9NY26 324 aa17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 NXT1Q9UKK6 140 aaKnown RBP17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 BAIAP2Q9UQB8 552 aa17.55■□□□□ 0.4
RAB3IP-205ENST00000417413 TRBV11-1A0A0K0K1C0 115 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 HTR3EA5X5Y0 456 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 LRRN3E7EW58 273 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 SOCS6O14544 535 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 HCRTR2O43614 444 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 CBFA2T3O75081 653 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 OR7A10O76100 309 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 KLK3P07288 261 aaPredicted RBP17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 HTR1FP30939 366 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 SLC6A6P31641 620 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 EVI2BP34910 448 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 SLC1A3P43003 542 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 SLC9A3P48764 834 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 NCS1P62166 190 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 DYNC1I2Q13409 638 aaKnown RBP17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 FAM198BQ6UWH4 519 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 NDNFQ8TB73 568 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 TBC1D15Q8TC07 691 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 C12orf10Q9HB07 376 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 C19orf25Q9UFG5 118 aaPredicted RBP17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 EXOGQ9Y2C4 368 aaKnown RBP17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 PCDHGA1Q9Y5H4 931 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 LOC102723996A0A087X1L8 192 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 FAM183AA6NL82 134 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 B4E171 279 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 APOL3O95236 402 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 PPP1R3DO95685 299 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 HSMCR30P0CW71 290 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 TSPAN7P41732 249 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 LIMK1P53667 647 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 EFR3AQ14156 821 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 SPHARQ15513 63 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 TSTQ16762 297 aaKnown RBP17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 PLBD1Q6P4A8 553 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 ZNF517Q6ZMY9 492 aaPredicted RBP17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 STRADBQ9C0K7 418 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 RACGAP1Q9H0H5 632 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 GPN3Q9UHW5 284 aaPredicted RBP17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 PCDHGA3Q9Y5H0 932 aa17.54■□□□□ 0.4
RAB3IP-205ENST00000417413 AIREO43918 545 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 NDUFB2O95178 105 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 SCG5P05408 212 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 PEPDP12955 493 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 TACR3P29371 465 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 EGR4Q05215 589 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 TOMM34Q15785 309 aaPredicted RBP17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 SSX1Q16384 188 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 FAM69BQ5VUD6 431 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 NIPAL3Q6P499 406 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 ATCAYQ86WG3 371 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 GID4Q8IVV7 300 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 OR5W2Q8NH69 310 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 ZNF563Q8TA94 476 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 THAP3Q8WTV1 239 aaPredicted RBP17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 LIPHQ8WWY8 451 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 PTP4A1Q93096 173 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 HGDQ93099 445 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 MR1Q95460 341 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 HCAR1Q9BXC0 346 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 ULBP3Q9BZM4 244 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 MED20Q9H944 212 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 FAM86C1Q9NVL1 165 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 H2AFY2Q9P0M6 372 aaPredicted RBP17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 ZNF337Q9Y3M9 751 aa17.53■□□□□ 0.4
RAB3IP-205ENST00000417413 WWP2O00308 870 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 SCO2O43819 266 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 UMODP07911 640 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 TGFBR1P36897 503 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 FBXW4P57775 412 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 RPS4XP62701 263 aaKnown RBP17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 MEPCEQ7L2J0 689 aaKnown RBP17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 SHFQ7M4L6 423 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 OR5L2Q8NGL0 311 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 OR5M3Q8NGP4 307 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 DYNC2LI1Q8TCX1 351 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 DEPDC7Q96QD5 511 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 CMKLR1Q99788 373 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 PARD6AQ9NPB6 346 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 CHRNA9Q9UGM1 479 aa17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 EXOSC1Q9Y3B2 195 aaKnown RBP17.52■□□□□ 0.4
RAB3IP-205ENST00000417413 TEX51A0A1B0GUA7 166 aa17.51■□□□□ 0.39
RAB3IP-205ENST00000417413 TMEM129A0AVI4 362 aa17.51■□□□□ 0.39
RAB3IP-205ENST00000417413 CCRL2O00421 344 aa17.51■□□□□ 0.39
RAB3IP-205ENST00000417413 MYL12BO14950 172 aa17.51■□□□□ 0.39
RAB3IP-205ENST00000417413 KLF7O75840 302 aaPredicted RBP17.51■□□□□ 0.39
RAB3IP-205ENST00000417413 LIMS3P0CW19 117 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms