RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 THAP3Q8WTV1 239 aaPredicted RBP9.12□□□□□ -0.95
DDB1-202ENST00000414411 ZCCHC14Q8WYQ9 949 aaKnown RBP9.12□□□□□ -0.95
DDB1-202ENST00000414411 CRELD1Q96HD1 420 aa9.12□□□□□ -0.95
DDB1-202ENST00000414411 THOC3Q96J01 351 aaKnown RBP9.12□□□□□ -0.95
DDB1-202ENST00000414411 GAL3ST4Q96RP7 486 aa9.12□□□□□ -0.95
DDB1-202ENST00000414411 USB1Q9BQ65 265 aaKnown RBP9.12□□□□□ -0.95
DDB1-202ENST00000414411 CENPOQ9BU64 300 aa9.12□□□□□ -0.95
DDB1-202ENST00000414411 PIEZO2Q9H5I5 2752 aa9.12□□□□□ -0.95
DDB1-202ENST00000414411 TAS2R16Q9NYV7 291 aa9.12□□□□□ -0.95
DDB1-202ENST00000414411 GTF2A1LQ9UNN4 478 aa9.12□□□□□ -0.95
DDB1-202ENST00000414411 SLC9A8Q9Y2E8 581 aa9.12□□□□□ -0.95
DDB1-202ENST00000414411 KCNMB2Q9Y691 235 aa9.12□□□□□ -0.95
DDB1-202ENST00000414411 PRRC2CQ9Y520 2896 aaKnown RBP9.12□□□□□ -0.95
DDB1-202ENST00000414411 NBEAQ8NFP9 2946 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 AGR2O95994 175 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 ADRA2AP08913 450 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 GRK5P34947 590 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 TRHRP34981 398 aaPredicted RBP9.11□□□□□ -0.95
DDB1-202ENST00000414411 NR0B1P51843 470 aaKnown RBP9.11□□□□□ -0.95
DDB1-202ENST00000414411 UCNP55089 124 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 MLF1P58340 268 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 ZNHIT3Q15649 155 aaPredicted RBP9.11□□□□□ -0.95
DDB1-202ENST00000414411 DEFB109BQ30KR1 87 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 ARMCX4Q5H9R4 360 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 TMEM201Q5SNT2 666 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 PRAMEF8Q5VWM4 474 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 PRAMEF7Q5VXH5 474 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 HLA-DQA1Q5Y7H0 255 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 DESI1Q6ICB0 168 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 ZNF554Q86TJ5 538 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 RPS19BP1Q86WX3 136 aaKnown RBP9.11□□□□□ -0.95
DDB1-202ENST00000414411 BRIX1Q8TDN6 353 aaKnown RBP9.11□□□□□ -0.95
DDB1-202ENST00000414411 PIK3R3Q92569 461 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 CDS1Q92903 461 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 WNT2BQ93097 391 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 POLR2J3Q9H1A7 115 aaKnown RBP9.11□□□□□ -0.95
DDB1-202ENST00000414411 SLC25A19Q9HC21 320 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 CPNE5Q9HCH3 593 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 MAN2C1Q9NTJ4 1040 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 A0A0G2JPF8 293 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 GXYLT2A0PJZ3 443 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 HNRNPCL2B2RXH8 293 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 HNRNPCL3B7ZW38 293 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 H3BN98 237 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 WWP2O00308 870 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 ENTPD6O75354 484 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 CEACAM4O75871 244 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 KCNK2O95069 426 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 LGI1O95970 557 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 TP53P04637 393 aaPredicted RBP9.11□□□□□ -0.95
DDB1-202ENST00000414411 IGFBP1P08833 259 aaPredicted RBP9.11□□□□□ -0.95
DDB1-202ENST00000414411 HNRNPCL4P0DMR1 293 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 RGS6P49758 472 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 PSPHP78330 225 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 ALDH6A1Q02252 535 aaKnown RBP9.11□□□□□ -0.95
DDB1-202ENST00000414411 INAQ16352 499 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 NNATQ16517 81 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 ARHGAP11BQ3KRB8 267 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 ACER2Q5QJU3 275 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 PODNL1Q6PEZ8 512 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 CD300LDQ6UXZ3 194 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 USP43Q70EL4 1123 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 OR6T1Q8NGN1 323 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 PRRC1Q96M27 445 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 DACH2Q96NX9 599 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 IL4I1Q96RQ9 567 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 LMF1Q96S06 567 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 SDF2Q99470 211 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 FNDC11Q9BVV2 318 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 DSN1Q9H410 356 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 CDCP1Q9H5V8 836 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 Q9N2J8 555 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 CBLCQ9ULV8 474 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 LIPT1Q9Y234 373 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 YARS2Q9Y2Z4 477 aaKnown RBP9.11□□□□□ -0.95
DDB1-202ENST00000414411 IFT52Q9Y366 437 aa9.11□□□□□ -0.95
DDB1-202ENST00000414411 EXPH5Q8NEV8 1989 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 CPAMD8Q8IZJ3 1885 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 USP24Q9UPU5 2620 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 METTL15A6NJ78 407 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 PIP5K1CO60331 668 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 FCMRO60667 390 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 ITGA10O75578 1167 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 OR2J2O76002 312 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 ZIC2O95409 532 aaPredicted RBP9.1□□□□□ -0.95
DDB1-202ENST00000414411 IGKV1D-16P01601 117 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 GUSBP08236 651 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 NAGAP17050 411 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 ITGA3P26006 1051 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 ABCD3P28288 659 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 PSMD7P51665 324 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 TMPRSS3P57727 454 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 POU6F2P78424 691 aaPredicted RBP9.1□□□□□ -0.95
DDB1-202ENST00000414411 COX10Q12887 443 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 ZNF404Q494X3 552 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 GPAT3Q53EU6 434 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 B3GNTL1Q67FW5 361 aaPredicted RBP9.1□□□□□ -0.95
DDB1-202ENST00000414411 FCRLBQ6BAA4 426 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 C19orf48Q6RUI8 117 aa9.1□□□□□ -0.95
DDB1-202ENST00000414411 HMGN2P46Q86SG4 172 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms