RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 CDHR4A6H8M9 788 aa23.38■■□□□ 1.33
VEGFA-207ENST00000413642 ATE1O95260 518 aa23.38■■□□□ 1.33
VEGFA-207ENST00000413642 LRIF1Q5T3J3 769 aa23.38■■□□□ 1.33
VEGFA-207ENST00000413642 BCO1Q9HAY6 547 aa23.38■■□□□ 1.33
VEGFA-207ENST00000413642 GP6Q9HCN6 339 aa23.38■■□□□ 1.33
VEGFA-207ENST00000413642 CALML5Q9NZT1 146 aa23.38■■□□□ 1.33
VEGFA-207ENST00000413642 KLHL9Q9P2J3 617 aa23.38■■□□□ 1.33
VEGFA-207ENST00000413642 ZNF443Q9Y2A4 671 aaPredicted RBP23.38■■□□□ 1.33
VEGFA-207ENST00000413642 SPIN1Q9Y657 262 aaPredicted RBP23.38■■□□□ 1.33
VEGFA-207ENST00000413642 ZNF814B7Z6K7 855 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 GCM2O75603 506 aaPredicted RBP23.37■■□□□ 1.33
VEGFA-207ENST00000413642 RAF1P04049 648 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 PRG2P13727 222 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 LOXP28300 417 aaPredicted RBP23.37■■□□□ 1.33
VEGFA-207ENST00000413642 ACAA2P42765 397 aaKnown RBP23.37■■□□□ 1.33
VEGFA-207ENST00000413642 ATP4BP51164 291 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 SQLEQ14534 574 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 LIN52Q52LA3 116 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 GABRG1Q8N1C3 465 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 FOXC2Q99958 501 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 ACTR6Q9GZN1 396 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 NPHS2Q9NP85 383 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 VAPAQ9P0L0 249 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 PRSS50Q9UI38 385 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 AKAP6Q13023 2319 aa23.37■■□□□ 1.33
VEGFA-207ENST00000413642 HRNRQ86YZ3 2850 aaPredicted RBP23.36■■□□□ 1.33
VEGFA-207ENST00000413642 A0A0G2JPF8 293 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 ZC3H12DA2A288 527 aaKnown RBP23.36■■□□□ 1.33
VEGFA-207ENST00000413642 HNRNPCL2B2RXH8 293 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 HNRNPCL3B7ZW38 293 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 HNRNPCL1O60812 293 aaKnown RBP23.36■■□□□ 1.33
VEGFA-207ENST00000413642 EDF1O60869 148 aaKnown RBP23.36■■□□□ 1.33
VEGFA-207ENST00000413642 RAMP1O60894 148 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 HNRNPCL4P0DMR1 293 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 BMP2P12643 396 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 NCF2P19878 526 aaPredicted RBP23.36■■□□□ 1.33
VEGFA-207ENST00000413642 SLC1A3P43003 542 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 POLR2HP52434 150 aaKnown RBP23.36■■□□□ 1.33
VEGFA-207ENST00000413642 CSNK2A1P68400 391 aaPredicted RBP23.36■■□□□ 1.33
VEGFA-207ENST00000413642 MTDHQ86UE4 582 aaKnown RBP23.36■■□□□ 1.33
VEGFA-207ENST00000413642 RSPO3Q9BXY4 272 aaPredicted RBP23.36■■□□□ 1.33
VEGFA-207ENST00000413642 IKZF5Q9H5V7 419 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 A4GALTQ9NPC4 353 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 ZNF446Q9NWS9 450 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 GPR52Q9Y2T5 361 aa23.36■■□□□ 1.33
VEGFA-207ENST00000413642 TRBV5-3A0A0A0MS03 114 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 FAAHO00519 579 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 KLF4O43474 513 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 ADAP00813 363 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 HTR3AP46098 478 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 OR2B6P58173 313 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 KEAP1Q14145 624 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 ABLIM2Q6H8Q1 611 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 ALKBH2Q6NS38 261 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 WFDC8Q8IUA0 241 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 CCDC103Q8IW40 242 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 ADAM19Q9H013 955 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 CXXC4Q9H2H0 198 aa23.35■■□□□ 1.33
VEGFA-207ENST00000413642 THUMPD1Q9NXG2 353 aaKnown RBP23.35■■□□□ 1.33
VEGFA-207ENST00000413642 TMEM247A6NEH6 219 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 PMS2P2O95744 297 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 IMPDH2P12268 514 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 PSMB1P20618 241 aaKnown RBP23.34■■□□□ 1.33
VEGFA-207ENST00000413642 ZNF440Q8IYI8 595 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 CADM2Q8N3J6 435 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 S100PBPQ96BU1 408 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 SPATA9Q9BWV2 254 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 RAD21L1Q9H4I0 556 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 ZNF385DQ9H6B1 395 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 BCL2L10Q9HD36 194 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 HDGFL3Q9Y3E1 203 aa23.34■■□□□ 1.33
VEGFA-207ENST00000413642 ZNF716A6NP11 495 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 ZNF724A8MTY0 619 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 FRS3O43559 492 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 PGM3O95394 542 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 THBS1P07996 1170 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 PPP3CBP16298 524 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 OR3A2P47893 321 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 HOXC5Q00444 222 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 FADDQ13158 208 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 LARS2Q15031 903 aaKnown RBP23.33■■□□□ 1.33
VEGFA-207ENST00000413642 ZNF311Q5JNZ3 666 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 RNF220Q5VTB9 566 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 SERPINA11Q86U17 422 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 NFKBIDQ8NI38 313 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 TACO1Q9BSH4 297 aaKnown RBP23.33■■□□□ 1.33
VEGFA-207ENST00000413642 FANCFQ9NPI8 374 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 TMEM181Q9P2C4 612 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 EDARQ9UNE0 448 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 ZNF232Q9UNY5 417 aa23.33■■□□□ 1.33
VEGFA-207ENST00000413642 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-207ENST00000413642 A0A1W2PP18 115 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 ZNF208O43345 1280 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 UQCRBP14927 111 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 CD53P19397 219 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 NTF4P34130 210 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 CLK1P49759 484 aaKnown RBP23.32■■□□□ 1.32
VEGFA-207ENST00000413642 SF3A3Q12874 501 aaKnown RBP eCLIP23.32■■□□□ 1.329e-12■■■■■ 32
VEGFA-207ENST00000413642 BNIP2Q12982 314 aa23.32■■□□□ 1.32
VEGFA-207ENST00000413642 DEFB113Q30KQ7 82 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms