RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 CCDC103Q8IW40 242 aa16.95■□□□□ 0.3
CPSF7-204ENST00000413232 ZNF100Q8IYN0 542 aa16.95■□□□□ 0.3
CPSF7-204ENST00000413232 MREGQ8N565 214 aa16.95■□□□□ 0.3
CPSF7-204ENST00000413232 CNOT9Q92600 299 aaKnown RBP16.95■□□□□ 0.3
CPSF7-204ENST00000413232 SLC35A5Q9BS91 424 aa16.95■□□□□ 0.3
CPSF7-204ENST00000413232 SLCO5A1Q9H2Y9 848 aa16.95■□□□□ 0.3
CPSF7-204ENST00000413232 CHRNA9Q9UGM1 479 aa16.95■□□□□ 0.3
CPSF7-204ENST00000413232 HAO1Q9UJM8 370 aa16.95■□□□□ 0.3
CPSF7-204ENST00000413232 SLC35A3Q9Y2D2 325 aa16.95■□□□□ 0.3
CPSF7-204ENST00000413232 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.95■□□□□ 0.3
CPSF7-204ENST00000413232 CUBNO60494 3623 aa16.95■□□□□ 0.3
CPSF7-204ENST00000413232 ARFGEF3Q5TH69 2177 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 A0A1W2PP18 115 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 HMGN4O00479 90 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 AP3D1O14617 1153 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 CCNA2P20248 432 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 APOBEC1P41238 236 aaKnown RBP16.94■□□□□ 0.3
CPSF7-204ENST00000413232 NME5P56597 212 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 UFM1P61960 85 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 CSNK2A1P68400 391 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-204ENST00000413232 PPP2R2BQ00005 443 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 SYPL1Q16563 259 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 FAM174BQ3ZCQ3 159 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 TIMM23BQ5SRD1 257 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 ATAD3BQ5T9A4 648 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 ANXA8L1Q5VT79 327 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 DNM1P46Q6ZS02 220 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 ANKFN1Q8N957 763 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 ZNF563Q8TA94 476 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 SLC25A43Q8WUT9 341 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-204ENST00000413232 GTPBP3Q969Y2 492 aaKnown RBP16.94■□□□□ 0.3
CPSF7-204ENST00000413232 ARL8AQ96BM9 186 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 USB1Q9BQ65 265 aaKnown RBP16.94■□□□□ 0.3
CPSF7-204ENST00000413232 INPP5KQ9BT40 448 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 TRAF4Q9BUZ4 470 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-204ENST00000413232 POLE3Q9NRF9 147 aa16.94■□□□□ 0.3
CPSF7-204ENST00000413232 CISD1Q9NZ45 108 aaKnown RBP16.94■□□□□ 0.3
CPSF7-204ENST00000413232 MARCOQ9UEW3 520 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-204ENST00000413232 A0A1W2PR80 420 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 OR5H1A6NKK0 313 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 ABCD4O14678 606 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 RGS16O15492 202 aaPredicted RBP16.93■□□□□ 0.3
CPSF7-204ENST00000413232 RAD51DO75771 328 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 PMS2P2O95744 297 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 LBPP18428 481 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 GGT1P19440 569 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 CDKN2CP42773 168 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 IDH2P48735 452 aaKnown RBP16.93■□□□□ 0.3
CPSF7-204ENST00000413232 SPOCK1Q08629 439 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 PDK3Q15120 406 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 GPAT3Q53EU6 434 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 TNFAIP8L3Q5GJ75 292 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 FBXW9Q5XUX1 488 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 GRINAQ7Z429 371 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 RNF130Q86XS8 419 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 TRMT61AQ96FX7 289 aaKnown RBP16.93■□□□□ 0.3
CPSF7-204ENST00000413232 REG4Q9BYZ8 158 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 SLC38A1Q9H2H9 487 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 MEAF6Q9HAF1 191 aa16.93■□□□□ 0.3
CPSF7-204ENST00000413232 SSU72Q9NP77 194 aaKnown RBP16.93■□□□□ 0.3
CPSF7-204ENST00000413232 NOSIPQ9Y314 301 aaKnown RBP16.93■□□□□ 0.3
CPSF7-204ENST00000413232 GOLGA8QA0A0J9YX86 632 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 GOLGA8OA6NCC3 632 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 E9PBE3 544 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 GOLGA8NF8WBI6 632 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 AGR2O95994 175 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 CHRM4P08173 479 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 IDUAP35475 653 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 CHI3L1P36222 383 aaPredicted RBP16.92■□□□□ 0.3
CPSF7-204ENST00000413232 KHKP50053 298 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 H3F3AP84243 136 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 COX20Q5RI15 118 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 DTX2Q86UW9 622 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 OR52N5Q8NH56 324 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 MUCL1Q96DR8 90 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 CCDC115Q96NT0 180 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 EXOSC3Q9NQT5 275 aaKnown RBP16.92■□□□□ 0.3
CPSF7-204ENST00000413232 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.92■□□□□ 0.3
CPSF7-204ENST00000413232 BTNL2Q9UIR0 455 aa16.92■□□□□ 0.3
CPSF7-204ENST00000413232 CCDC154A6NI56 674 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 E7EQL1 145 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 SDHDO14521 159 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 TM9SF1O15321 606 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 IMPDH2P12268 514 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 S100A3P33764 101 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 SLC16A1P53985 500 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 CDH11P55287 796 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 BST1Q10588 318 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 STX3Q13277 289 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 MAPK11Q15759 364 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 OGFOD2Q6N063 350 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 UBE2J2Q8N2K1 259 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 ARFGAP2Q8N6H7 521 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 VPS37AQ8NEZ2 397 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 OR52E4Q8NGH9 312 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 OIT3Q8WWZ8 545 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 APH1AQ96BI3 265 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 PARD6BQ9BYG5 372 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 EMC3Q9P0I2 261 aa16.91■□□□□ 0.3
CPSF7-204ENST00000413232 OSGIN1Q9UJX0 560 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms