RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 CANT1Q8WVQ1 401 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 DNAJA4Q8WW22 397 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 FCAMRQ8WWV6 532 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 CRYGNQ8WXF5 182 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 DEDD2Q8WXF8 326 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 TMEM190Q8WZ59 177 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 PPWD1Q96BP3 646 aaKnown RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 SGK3Q96BR1 496 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 TESCQ96BS2 214 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 RCN3Q96D15 328 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 LRRC39Q96DD0 335 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 OMA1Q96E52 524 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZHX1-C8orf76Q96EF9 292 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 AURKBQ96GD4 344 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 POM121L2Q96KW2 1035 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 GPR137Q96N19 417 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 RDH12Q96NR8 316 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 TSSK2Q96PF2 358 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 RBM14Q96PK6 669 aaKnown RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 OR52B2Q96RD2 323 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 KCTD14Q9BQ13 255 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 LXNQ9BS40 222 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 ATG101Q9BSB4 218 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 FEM1AQ9BSK4 669 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 CCDC32Q9BV29 185 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 UGT2B28Q9BY64 529 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 REG4Q9BYZ8 158 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 RAB34Q9BZG1 259 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 ADNPQ9H2P0 1102 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 PPA2Q9H2U2 334 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 SPNS1Q9H2V7 528 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 UBQLN3Q9H347 655 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 RIMS4Q9H426 269 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 DUSP21Q9H596 190 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 HEXA-AS1Q9H8Q6 139 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 DBNDD1Q9H9R9 158 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 WDR41Q9HAD4 459 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 EFCAB1Q9HAE3 211 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 POPDC2Q9HBU9 364 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 MID1IP1Q9NPA3 183 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 FANCFQ9NPI8 374 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 IFT46Q9NQC8 304 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 POLE4Q9NR33 117 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 IARS2Q9NSE4 1012 aaKnown RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 PRR34Q9NV39 138 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 MED9Q9NWA0 146 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 P4HTMQ9NXG6 502 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 SMPD3Q9NY59 655 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 MRPL39Q9NYK5 338 aaKnown RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZNF624Q9P2J8 865 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 MBD2Q9UBB5 411 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 ABCD2Q9UBJ2 740 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 MARCOQ9UEW3 520 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 NARFQ9UHQ1 456 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 ATP6V1HQ9UI12 483 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 GLS2Q9UI32 602 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 TRMT6Q9UJA5 497 aaKnown RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 STOML2Q9UJZ1 356 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 RUVBL2Q9Y230 463 aaKnown RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 CAB39Q9Y376 341 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 COQ4Q9Y3A0 265 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 PRELID3BQ9Y3B1 194 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 KLK4Q9Y5K2 254 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 FKBP7Q9Y680 259 aa2.13□□□□□ -2.07
HMGB3P2-201ENST00000411913 SCN4AP35499 1836 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 AFDNP55196 1824 aaKnown RBP2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 TNS3Q68CZ2 1445 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 A0A075B6Q4 140 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 TRAV18A0A075B6X5 111 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 A0A1W2PRV1 198 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 HEATR9A2RTY3 570 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 MPTX1A8MV57 137 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 PRSS46E5RG02 174 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 LOC110117498-PIK3R3F6TDL0 507 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 F8W036 122 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 SLCO1B7G3V0H7 640 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 DDX39AO00148 427 aaKnown RBP2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 EEF2KO00418 725 aaKnown RBP2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 ZBTB5O15062 677 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 CTDSPLO15194 276 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 CHADO15335 359 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 AKR7A2O43488 359 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 GATCO43716 136 aaKnown RBP2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 GLRA3O75311 464 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 CRCPO75575 148 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 PIAS1O75925 651 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 CDK2AP2O75956 126 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 KRT33AO76009 404 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 LYPLA2O95372 231 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 SEC24AO95486 1093 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 TDP2O95551 362 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 SNAP29O95721 258 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 CLIC3O95833 236 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 ASS1P00966 412 aaKnown RBP2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 EDN1P05305 212 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 GPIP06744 558 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 PRSS56P0CW18 603 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 RRASP10301 218 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 UROSP10746 265 aa2.12□□□□□ -2.07
HMGB3P2-201ENST00000411913 UMPSP11172 480 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms