RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 GHDCQ8N2G8 530 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 MVB12AQ96EY5 273 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 MED18Q9BUE0 208 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 FAIM2Q9BWQ8 316 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 ULBP3Q9BZM4 244 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 HDHD2Q9H0R4 259 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 PIGUQ9H490 435 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 LYRM4Q9HD34 91 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 MIEF1Q9NQG6 463 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 SPACA6W5XKT8 324 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 H0YIG0 161 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 PRKYO43930 277 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 OR10H3O60404 316 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 RAB36O95755 333 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 C6orf47O95873 294 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 TPOP07202 933 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 NR2F6P10588 404 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 SDHBP21912 280 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 FBLP22087 321 aaKnown RBP13.19□□□□□ -0.3
MINDY4-202ENST00000409881 SSTR2P30874 369 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 ARHGAP40Q5TG30 622 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 ANXA8L1Q5VT79 327 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 TYW3Q6IPR3 259 aaKnown RBP13.19□□□□□ -0.3
MINDY4-202ENST00000409881 LRRC17Q8N6Y2 441 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 OR11H7Q8NGC8 314 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 LHFPL5Q8TAF8 219 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 UCN3Q969E3 161 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 CREB3L1Q96BA8 519 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 PEX11GQ96HA9 241 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 TAAR9Q96RI9 348 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 ATF6BQ99941 703 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 REEP4Q9H6H4 257 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 KCMF1Q9P0J7 381 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 C5AR2Q9P296 337 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 EXO1Q9UQ84 846 aaKnown RBP13.19□□□□□ -0.3
MINDY4-202ENST00000409881 KNTC1P50748 2209 aa13.19□□□□□ -0.3
MINDY4-202ENST00000409881 TRAV6A0A075B6T7 132 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 RPS10-NUDT3A0A1W2PQS6 291 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 TPPPO94811 219 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 PAHP00439 452 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 IFNW1P05000 195 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 BUD31P41223 144 aaPredicted RBP13.18□□□□□ -0.3
MINDY4-202ENST00000409881 TNFRSF17Q02223 184 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 GPR176Q14439 515 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 C12orf73Q69YU5 71 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 QSOX2Q6ZRP7 698 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 OR8J1Q8NGP2 316 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 CDCP1Q9H5V8 836 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 ZNF304Q9HCX3 659 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 SF3B6Q9Y3B4 125 aaKnown RBP13.18□□□□□ -0.3
MINDY4-202ENST00000409881 FURINP09958 794 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 ICAM2P13598 275 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 TLX1P31314 330 aaPredicted RBP13.18□□□□□ -0.3
MINDY4-202ENST00000409881 CCT3P49368 545 aaKnown RBP13.18□□□□□ -0.3
MINDY4-202ENST00000409881 RAB38P57729 211 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 EXOSC2Q13868 293 aaKnown RBP13.18□□□□□ -0.3
MINDY4-202ENST00000409881 INSL4Q14641 139 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 PUM1Q14671 1186 aaKnown RBP eCLIP13.18□□□□□ -0.3
MINDY4-202ENST00000409881 TRILQ7L0X0 811 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 OR51Q1Q8NH59 317 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 CIDECQ96AQ7 238 aaPredicted RBP13.18□□□□□ -0.3
MINDY4-202ENST00000409881 PPCDCQ96CD2 204 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 KCNN2Q9H2S1 579 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 TRPC4Q9UBN4 977 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 DIMT1Q9UNQ2 313 aaKnown RBP13.18□□□□□ -0.3
MINDY4-202ENST00000409881 GSTK1Q9Y2Q3 226 aa13.18□□□□□ -0.3
MINDY4-202ENST00000409881 LANCL1O43813 399 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 ADAP00813 363 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 RNH1P13489 461 aaKnown RBP13.17□□□□□ -0.3
MINDY4-202ENST00000409881 PCSK2P16519 638 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 IL32P24001 234 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 CD79BP40259 229 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 WNT4P56705 351 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 EEF1A2Q05639 463 aaKnown RBP13.17□□□□□ -0.3
MINDY4-202ENST00000409881 DBPQ10586 325 aaPredicted RBP13.17□□□□□ -0.3
MINDY4-202ENST00000409881 DSG2Q14126 1118 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 GPR139Q6DWJ6 353 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 FAM180BQ6P0A1 224 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 B3GLCTQ6Y288 498 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 SHFQ7M4L6 423 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 OR52N2Q8NGI0 321 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 DDA1Q9BW61 102 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 POLR2J3Q9H1A7 115 aaKnown RBP13.17□□□□□ -0.3
MINDY4-202ENST00000409881 FOLH1BQ9HBA9 442 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 SLCO1C1Q9NYB5 712 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 CFAP54Q96N23 3096 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 SHISA3A0PJX4 238 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 H3BUI4 141 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 PGRMC2O15173 223 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 CDC123O75794 336 aaPredicted RBP13.17□□□□□ -0.3
MINDY4-202ENST00000409881 TNFSF15O95150 251 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 DRD2P14416 443 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 SOX18P35713 384 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 CHI3L1P36222 383 aaPredicted RBP13.17□□□□□ -0.3
MINDY4-202ENST00000409881 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 CRB2Q5IJ48 1285 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 RPS26P11Q5JNZ5 115 aaPredicted RBP13.17□□□□□ -0.3
MINDY4-202ENST00000409881 TMEM164Q5U3C3 297 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 RNLSQ5VYX0 342 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 TMEM107Q6UX40 140 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms