RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SCRT1Q9BWW7 348 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 NXF5Q9H1B4 397 aaKnown RBP2.38□□□□□ -2.03
PMS1-203ENST00000409593 NTN4Q9HB63 628 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 PIN4Q9Y237 131 aaKnown RBP2.38□□□□□ -2.03
PMS1-203ENST00000409593 V9GY05 133 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 ABCC9O60706 1549 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 PLEKHH1Q9ULM0 1364 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 IGLV4-60A0A075B6I1 120 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 A0A096LNJ9 63 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 G3V4G9 280 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 CLDN5O00501 218 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 MSH4O15457 936 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 HCRTR1O43613 425 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 SCGB2A1O75556 95 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 RPS9P46781 194 aaKnown RBP2.37□□□□□ -2.03
PMS1-203ENST00000409593 CAMLGP49069 296 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 TRIM16LQ309B1 348 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 C1orf100Q5SVJ3 147 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 RALGPS2Q86X27 583 aaPredicted RBP2.37□□□□□ -2.03
PMS1-203ENST00000409593 KIR3DL3Q8N743 410 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 ATP6V0D2Q8N8Y2 350 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 OR51S1Q8NGJ8 323 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 OR6X1Q8NH79 312 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 MRPL38Q96DV4 380 aaKnown RBP2.37□□□□□ -2.03
PMS1-203ENST00000409593 FOPNLQ96NB1 174 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 KCNK16Q96T55 309 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 ZNF282Q9UDV7 671 aaPredicted RBP2.37□□□□□ -2.03
PMS1-203ENST00000409593 CHMP2BQ9UQN3 213 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 MAP3K15Q6ZN16 1313 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 NCAPD2Q15021 1401 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 LRCOL1A6NCL2 159 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 A6NIZ1 184 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 LGI1O95970 557 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 ICAM2P13598 275 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 CRISP2P16562 243 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 TNNI3P19429 210 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 PGCP20142 388 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 TBXA2RP21731 343 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 FGF9P31371 208 aaPredicted RBP2.37□□□□□ -2.03
PMS1-203ENST00000409593 HNRNPA3P51991 378 aaKnown RBP2.37□□□□□ -2.03
PMS1-203ENST00000409593 HSPA2P54652 639 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 KRTAP10-10P60014 251 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 RAP1BP61224 184 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 NSUN5P1Q3KNT7 163 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 CBLN3Q6UW01 205 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 SYT10Q6XYQ8 523 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 DUSP18Q8NEJ0 188 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 BRSK1Q8TDC3 778 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 ST8SIA1Q92185 356 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 C12orf66Q96MD2 445 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 HIST1H4GQ99525 98 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 RTBDNQ9BSG5 229 aaPredicted RBP2.37□□□□□ -2.03
PMS1-203ENST00000409593 NAT9Q9BTE0 207 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 KRT23Q9C075 422 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 PHF11Q9UIL8 331 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 TBX21Q9UL17 535 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 TRAF3IP3Q9Y228 551 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 CLCA3PQ9Y6N3 262 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 FRMPD4Q14CM0 1322 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 CLSPNQ9HAW4 1339 aa2.37□□□□□ -2.03
PMS1-203ENST00000409593 A0A1B0GUL7 405 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 C11orf94C9JXX5 98 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 E9PBE3 544 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 UFL1O94874 794 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 CHTF8P0CG12 524 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 ZNF823P16415 610 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 GAP43P17677 238 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 IL10P22301 178 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 CYP2F1P24903 491 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 YWHABP31946 246 aaKnown RBP2.36□□□□□ -2.03
PMS1-203ENST00000409593 SHMT2P34897 504 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 HPCAL1P37235 193 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 PMELP40967 661 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 SLAQ13239 276 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 PSG5Q15238 335 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 KLF17Q5JT82 389 aaPredicted RBP2.36□□□□□ -2.03
PMS1-203ENST00000409593 MFSD6LQ8IWD5 586 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 SAXO1Q8IYX7 474 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 ARPC1AQ92747 370 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 HSD3B7Q9H2F3 369 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 RHBGQ9H310 441 aa2.36□□□□□ -2.03
PMS1-203ENST00000409593 KRTAP4-16G5E9R7 235 aaPredicted RBP2.35□□□□□ -2.03
PMS1-203ENST00000409593 CTAGE5O15320 804 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 CHADO15335 359 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 PNMA6AP0CW24 399 aaPredicted RBP2.35□□□□□ -2.03
PMS1-203ENST00000409593 TPSB2P20231 275 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 CCND2P30279 289 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 KPNA2P52292 529 aaKnown RBP2.35□□□□□ -2.03
PMS1-203ENST00000409593 TPSAB1Q15661 275 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 ZNF571Q7Z3V5 609 aaPredicted RBP2.35□□□□□ -2.03
PMS1-203ENST00000409593 FAM9BQ8IZU0 186 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 FTMTQ8N4E7 242 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 TPRX1Q8N7U7 411 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 OR9G1Q8NH87 305 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 NDRG1Q92597 394 aaKnown RBP2.35□□□□□ -2.03
PMS1-203ENST00000409593 MRPS31Q92665 395 aaKnown RBP2.35□□□□□ -2.03
PMS1-203ENST00000409593 CEP170P1Q96L14 293 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 SELENOIQ9C0D9 397 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 OR11A1Q9GZK7 315 aa2.35□□□□□ -2.03
PMS1-203ENST00000409593 ROGDIQ9GZN7 287 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms