RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 OSGIN2Q9Y236 505 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 SPIN1Q9Y657 262 aaPredicted RBP14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 LRRK2Q5S007 2527 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 PTPN13Q12923 2485 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 HIVEP3Q5T1R4 2406 aa14.93□□□□□ -0.02
TSPAN4-208ENST00000409531 J3KTA2 159 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 GNGT2O14610 69 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 HCN1O60741 890 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 SEMA7AO75326 666 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 AGFG2O95081 481 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 NTN1O95631 604 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 H1F0P07305 194 aaKnown RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 CHMP24386 653 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 FASP25445 335 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 CDH12P55289 794 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 SPIBQ01892 262 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 GK3PQ14409 553 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 TRAM2Q15035 370 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 OR2T5Q6IEZ7 315 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 C3orf33Q6P1S2 294 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 GDF7Q7Z4P5 450 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 YRDCQ86U90 279 aaKnown RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 PIK3C3Q8NEB9 887 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 OR2T29Q8NH02 315 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 SFXN2Q96NB2 322 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 TSPAN10Q9H1Z9 355 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 LDAHQ9H6V9 325 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 NMNAT1Q9HAN9 279 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 S100A14Q9HCY8 104 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 DNAJB9Q9UBS3 223 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 OSGIN1Q9UJX0 560 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 RPH3AQ9Y2J0 694 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 TMED7-TICAM2A0A0A6YYA0 188 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 A0A1W2PRQ8 180 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 OR2M5A3KFT3 312 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 FFAR1O14842 300 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 SUSD5O60279 629 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 TIPRLO75663 272 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 DIRAS1O95057 198 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 PRSS23O95084 383 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 GADD45GO95257 159 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 IGHG3P01860 377 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 STSP08842 583 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 TCEA1P23193 301 aaKnown RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 RRM2P31350 389 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 RBPJQ06330 500 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 SELENBP1Q13228 472 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 DGCR6Q14129 220 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 TMEM44Q2T9K0 475 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 WIPI1Q5MNZ9 446 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 ATG4DQ86TL0 474 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 TSPYL5Q86VY4 417 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 NEIL3Q8TAT5 605 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 SLC25A43Q8WUT9 341 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 ZNF524Q96C55 264 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 DHRS1Q96LJ7 313 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 HS6ST2Q96MM7 605 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 DEFB127Q9H1M4 99 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 EXO5Q9H790 373 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 REEP1Q9H902 201 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 RHCGQ9UBD6 479 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 CHRNA9Q9UGM1 479 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 SLC5A6Q9Y289 635 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 TMED7Q9Y3B3 224 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 RRP15Q9Y3B9 282 aaKnown RBP14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 TESMINQ9Y4I5 508 aa14.92□□□□□ -0.02
TSPAN4-208ENST00000409531 USP9XQ93008 2570 aaPredicted RBP14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 A0A087WUJ7 227 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 TRGV5A0A0B4J1U4 118 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 CLOCKO15516 846 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 ZNF208O43345 1280 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 LDLRP01130 860 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 CELA3AP09093 270 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 RBM34P42696 430 aaKnown RBP14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 CMPK2Q5EBM0 449 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 POMZP3Q6PJE2 187 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 C5orf46Q6UWT4 87 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 ADGRG3Q86Y34 549 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 POC1BQ8TC44 478 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 BDH2Q9BUT1 245 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 ERRFI1Q9UJM3 462 aaPredicted RBP14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 TMCC3Q9ULS5 477 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 AP4B1Q9Y6B7 739 aa14.91□□□□□ -0.02
TSPAN4-208ENST00000409531 MED12Q93074 2177 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 A0A1B0GUH1 482 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 GJE1A6NN92 205 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 H3BNX3 289 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 TNFRSF11BO00300 401 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 ACTL6AO96019 429 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 CLK1P49759 484 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 HMGA2P52926 109 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 GFRA1P56159 465 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 B3GALT5-AS1P59052 145 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 RAC1P63000 192 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 ATP6AP1Q15904 470 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 C4orf17Q53FE4 359 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 FGD3Q5JSP0 725 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 TTC33Q6PID6 262 aaPredicted RBP14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 LINC00114Q6XXX2 140 aa14.9□□□□□ -0.02
TSPAN4-208ENST00000409531 RRM2BQ7LG56 351 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms