RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 ADAMTS14Q8WXS8 1223 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SGCDQ92629 289 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 NKD1Q969G9 470 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 PGAM5Q96HS1 289 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 OR6C1Q96RD1 312 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 PHOX2BQ99453 314 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 LRRC61Q9BV99 259 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM121BQ9BXQ6 578 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 UBQLN3Q9H347 655 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 NTN4Q9HB63 628 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 FAIMQ9NVQ4 179 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 POLHQ9Y253 713 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 MEMO1Q9Y316 297 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 RBM7Q9Y580 266 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 F5P12259 2224 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 CASP8AP2Q9UKL3 1982 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 TRAV27A0A087WT01 109 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 A0A1W2PQL4 384 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 A8MVM7 634 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 FAM227AF5H4B4 570 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 M0R129 80 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 UPK1BO75841 260 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 ATP1B1P05026 303 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 ITGA5P08648 1049 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 CD53P19397 219 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 FUT4P22083 530 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 STOMP27105 288 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 CA5AP35218 305 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 CBX5P45973 191 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 FNTBP49356 437 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC26A5P58743 744 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 FOXK2Q01167 660 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 ZP2Q05996 745 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 MRPL49Q13405 166 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 MADCAM1Q13477 382 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 FZD2Q14332 565 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 RAB11BQ15907 218 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 ACSM3Q53FZ2 586 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 TRIM61Q5EBN2 209 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM69Q5SWH9 247 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 BCL2L15Q5TBC7 163 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC22A10Q63ZE4 541 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 FBXO42Q6P3S6 717 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 LRFN4Q6PJG9 635 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF322Q6U7Q0 402 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 USP51Q70EK9 711 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 PRICKLE2Q7Z3G6 844 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 LINC01555Q8NAE3 123 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 LSM14AQ8ND56 463 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 OR5T3Q8NGG3 340 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 CNOT9Q92600 299 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC35B4Q969S0 331 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 CCDC74AQ96AQ1 378 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 LRRC3BQ96PB8 259 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 TNFRSF13CQ96RJ3 184 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 C7orf50Q9BRJ6 194 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SEMA4GQ9NTN9 838 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 DHCR7Q9UBM7 475 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 A0A075B6Q4 140 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 NAP1L6A6NFF2 107 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 METTL15A6NJ78 407 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 NOTOA8MTQ0 251 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 VSTM5A8MXK1 200 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SULT2B1O00204 365 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 ARHGAP33O14559 1287 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 NUDT21O43809 227 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 MTRF1O75570 445 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 PIAS2O75928 621 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 KCNK2O95069 426 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 PRSS23O95084 383 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 GSTT2P0CG29 244 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SOX3P41225 446 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 GNG2P59768 71 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 EIF5AP63241 154 aaKnown RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SF3B4Q15427 424 aaKnown RBP eCLIP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 CCBE1Q6UXH8 406 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 UNQ6126/PRO20091Q6UXV3 157 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 GRINAQ7Z429 371 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 PLCZ1Q86YW0 608 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SMRP1Q8NCR6 262 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 OR14L1PQ8NHC6 308 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 ELP5Q8TE02 316 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC25A43Q8WUT9 341 aaPredicted RBP4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 C7orf34Q96L11 122 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SFXN2Q96NB2 322 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 OR2A5Q96R48 311 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 ARHGDIGQ99819 225 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 GINS4Q9BRT9 223 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 FUZQ9BT04 418 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 POTEKPQ9BYX7 375 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 TTTY10Q9BZA0 68 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 FOXQ1Q9C009 403 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 LAT2Q9GZY6 243 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 UCK1Q9HA47 277 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 ALKBH4Q9NXW9 302 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 SH2B3Q9UQQ2 575 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 PLEKHA6Q9Y2H5 1048 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 NOX1Q9Y5S8 564 aa4.39□□□□□ -1.71
PCDH11X-207ENST00000406881 LCTP09848 1927 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms