RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 CDC42EP2O14613 210 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 ARPC5O15511 151 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 LINC01565O15544 149 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 WNT1P04628 370 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 AHCYP23526 432 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 GABRA3P34903 492 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 DSG2Q14126 1118 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 ZNF273Q14593 569 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 DEFB110Q30KQ9 67 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 FAM198BQ6UWH4 519 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 NHLRC1Q6VVB1 395 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 CXXC5Q7LFL8 322 aaKnown RBP13.91□□□□□ -0.18
ATG4B-206ENST00000405546 SFTPA2Q8IWL1 248 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 OR2T4Q8NH00 348 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 MYADMQ96S97 322 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 SOSTQ9BQB4 213 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 PITHD1Q9GZP4 211 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-206ENST00000405546 TESQ9UGI8 421 aaKnown RBP13.91□□□□□ -0.18
ATG4B-206ENST00000405546 ARHGEF17Q96PE2 2063 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-206ENST00000405546 HLA-DPB1P04440 258 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 C9orf50Q5SZB4 431 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 SLC6A19Q695T7 634 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 PARGQ86W56 976 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 MFSD9Q8NBP5 474 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 PFN4Q8NHR9 129 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 SCMH1Q96GD3 660 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 MTHFD2LQ9H903 347 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-206ENST00000405546 EXOSC1Q9Y3B2 195 aaKnown RBP13.91□□□□□ -0.18
ATG4B-206ENST00000405546 SLC9B1P1A6NJY1 282 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 L7N2F9 121 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 OR10H2O60403 315 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 TFP02787 698 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 PITPNBP48739 271 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 ADPRHP54922 357 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 SHC2P98077 582 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 TFF2Q03403 129 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 TPBGQ13641 420 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 RIN1Q13671 783 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 ZIC1Q15915 447 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 MINDY4Q4G0A6 757 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 C3orf38Q5JPI3 329 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 VN1R4Q7Z5H5 301 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 GPALPP1Q8IXQ4 340 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-206ENST00000405546 CD180Q99467 661 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 ARHGAP9Q9BRR9 750 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 C1QTNF2Q9BXJ5 285 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 HINT3Q9NQE9 182 aaKnown RBP13.91□□□□□ -0.18
ATG4B-206ENST00000405546 PRDM9Q9NQV7 894 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 MGAT4CQ9UBM8 478 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 ZNF443Q9Y2A4 671 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-206ENST00000405546 WDR87Q6ZQQ6 2873 aa13.91□□□□□ -0.18
ATG4B-206ENST00000405546 TRAV27A0A087WT01 109 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 FAM74A7A6NL05 159 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 J3QLW9 94 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 EGFP01133 1207 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 HLA-DQB1P01920 261 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 ZNF19P17023 458 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 SRSF5Q13243 272 aaKnown RBP13.9□□□□□ -0.18
ATG4B-206ENST00000405546 C1orf61Q13536 156 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 RUNX2Q13950 521 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 MLC1Q15049 377 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 FAM74A3Q4VXF1 159 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 MFSD12Q6NUT3 480 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 FIGLAQ6QHK4 219 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 TMEM64Q6YI46 380 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 C3P1Q6ZMU1 363 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 UBE2Q1Q7Z7E8 422 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 RANBP3LQ86VV4 465 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-206ENST00000405546 ADGRG3Q86Y34 549 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 WNT2BQ93097 391 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 ERMAPQ96PL5 475 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-206ENST00000405546 DMRTA2Q96SC8 542 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 EMC7Q9NPA0 242 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 TMEM74BQ9NUR3 256 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 E9PI62 339 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 SGK494L7N484 410 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 ZNF593O00488 134 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-206ENST00000405546 KHNYNO15037 678 aaKnown RBP13.9□□□□□ -0.18
ATG4B-206ENST00000405546 GMDSO60547 372 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 CTSVO60911 334 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 NTSR1P30989 418 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 ACSL1P33121 698 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 MAPK14Q16539 360 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 TMEM196Q5HYL7 178 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 FBXO42Q6P3S6 717 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 TMEM88Q6PEY1 159 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 FBXO46Q6PJ61 603 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-206ENST00000405546 DIO2Q92813 273 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 MOAP1Q96BY2 351 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 OR52D1Q9H346 318 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 CA10Q9NS85 328 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 ZNF69Q9UC07 566 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 SPACA6W5XKT8 324 aa13.9□□□□□ -0.18
ATG4B-206ENST00000405546 PDCD5O14737 125 aa13.89□□□□□ -0.19
ATG4B-206ENST00000405546 P2RX6O15547 441 aa13.89□□□□□ -0.19
ATG4B-206ENST00000405546 CXCL2P19875 107 aa13.89□□□□□ -0.19
ATG4B-206ENST00000405546 OMPP47874 163 aa13.89□□□□□ -0.19
ATG4B-206ENST00000405546 AKR1C2P52895 323 aa13.89□□□□□ -0.19
ATG4B-206ENST00000405546 AKR1C1Q04828 323 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms