RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SLC2A10O95528 541 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 HMGN1P05114 100 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 GRK5P34947 590 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 TMED10P49755 219 aaKnown RBP23.35■■□□□ 1.33
CPNE1-205ENST00000401607 GAS1P54826 345 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 EGR4Q05215 589 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 TBCEQ15813 527 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-205ENST00000401607 SYT6Q5T7P8 510 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-205ENST00000401607 NDUFAF7Q7L592 441 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 CACTIN-AS1Q8N1I8 211 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 LNX2Q8N448 690 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 DEFB124Q8NES8 71 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 B4GALNT2Q8NHY0 566 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 NAA50Q9GZZ1 169 aaKnown RBP23.35■■□□□ 1.33
CPNE1-205ENST00000401607 CXorf56Q9H5V9 222 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 SDK2Q58EX2 2172 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 OTOGLQ3ZCN5 2332 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 NSG1A0A0A6YYJ2 146 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 B4DXG7 233 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 LCKP06239 509 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 TMEM164Q5U3C3 297 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 UBE2UQ5VVX9 321 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 CYP4Z2PQ8N1L4 340 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 LRRC17Q8N6Y2 441 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 GPR119Q8TDV5 335 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 ZNF160Q9HCG1 818 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 GALNT9Q9HCQ5 603 aa23.35■■□□□ 1.33
CPNE1-205ENST00000401607 FARSAQ9Y285 508 aaKnown RBP23.35■■□□□ 1.33
CPNE1-205ENST00000401607 C2orf72A6NCS6 295 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 OR7A10O76100 309 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 WISP1O95388 367 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 NUDT14O95848 222 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 IGF2P01344 180 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 NTRK2Q16620 822 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 COL28A1Q2UY09 1125 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 SLC15A4Q8N697 577 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 ANKK1Q8NFD2 765 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 OR10G3Q8NGC4 313 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 LRFN3Q9BTN0 628 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 TAS2R16Q9NYV7 291 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 OSGIN1Q9UJX0 560 aa23.34■■□□□ 1.33
CPNE1-205ENST00000401607 ZNF701M0R085 212 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-205ENST00000401607 PRODHO43272 600 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 CDC40O60508 579 aaKnown RBP eCLIP23.33■■□□□ 1.33
CPNE1-205ENST00000401607 GSTT1P30711 240 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 PTGDSP41222 190 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 SLC9A3P48764 834 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 QPRTQ15274 297 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 AADACL4Q5VUY2 407 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 BICRALQ6AI39 1079 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 ZNF420Q8TAQ5 688 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-205ENST00000401607 SPACA9Q96E40 222 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-205ENST00000401607 PLEKHA8Q96JA3 519 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 DOK1Q99704 481 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 IFT27Q9BW83 186 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 CDCA4Q9BXL8 241 aa23.33■■□□□ 1.33
CPNE1-205ENST00000401607 MASP2O00187 686 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 ITGA10O75578 1167 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 OTX2P32243 289 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 C17orf67Q0P5P2 114 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 RTL4Q6ZR62 310 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 ESX1Q8N693 406 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 HRH3Q9Y5N1 445 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 COMMD3-BMI1R4GMX3 469 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 HTR3EA5X5Y0 456 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 ADORA3P0DMS8 318 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 CDK4P11802 303 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 GP1BBP13224 206 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 PSMB9P28065 219 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 SOX3P41225 446 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 SSPNQ14714 243 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 ZNF74Q16587 644 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 ZNF791Q3KP31 576 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-205ENST00000401607 OR5M10Q6IEU7 315 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 SLC43A2Q8N370 569 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 FCGR1BQ92637 280 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 C12orf43Q96C57 262 aaKnown RBP23.32■■□□□ 1.32
CPNE1-205ENST00000401607 PRRX2Q99811 253 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 HINT3Q9NQE9 182 aaKnown RBP23.32■■□□□ 1.32
CPNE1-205ENST00000401607 TAS2R10Q9NYW0 307 aa23.32■■□□□ 1.32
CPNE1-205ENST00000401607 PPP1R3DO95685 299 aa23.31■■□□□ 1.32
CPNE1-205ENST00000401607 PTHP01270 115 aa23.31■■□□□ 1.32
CPNE1-205ENST00000401607 SLC6A6P31641 620 aa23.31■■□□□ 1.32
CPNE1-205ENST00000401607 NBL1P41271 181 aa23.31■■□□□ 1.32
CPNE1-205ENST00000401607 FOXK2Q01167 660 aa23.31■■□□□ 1.32
CPNE1-205ENST00000401607 SLC35F1Q5T1Q4 408 aa23.31■■□□□ 1.32
CPNE1-205ENST00000401607 LIPHQ8WWY8 451 aa23.31■■□□□ 1.32
CPNE1-205ENST00000401607 COL25A1Q9BXS0 654 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-205ENST00000401607 WARS2Q9UGM6 360 aaKnown RBP23.31■■□□□ 1.32
CPNE1-205ENST00000401607 ZNF337Q9Y3M9 751 aa23.31■■□□□ 1.32
CPNE1-205ENST00000401607 PCSK5Q92824 1860 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 PCNX2A6NKB5 2137 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 ANKUB1A6NFN9 424 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 CCNA2P20248 432 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 ST13P50502 369 aaKnown RBP23.3■■□□□ 1.32
CPNE1-205ENST00000401607 RPS4XP62701 263 aaKnown RBP23.3■■□□□ 1.32
CPNE1-205ENST00000401607 B3GNT6Q6ZMB0 384 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 BBS1Q8NFJ9 593 aa23.3■■□□□ 1.32
CPNE1-205ENST00000401607 C9orf43Q8TAL5 461 aaPredicted RBP23.3■■□□□ 1.32
CPNE1-205ENST00000401607 TMEM80Q96HE8 168 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms