RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PDCD1LG2Q9BQ51 273 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 CRB3Q9BUF7 120 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 SLC6A5Q9Y345 797 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 BRWD1Q9NSI6 2320 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 CDC42EP2O14613 210 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 NARSO43776 548 aaKnown RBP15.81■□□□□ 0.12
PTPRA-205ENST00000399903 GIPP09681 153 aaPredicted RBP15.81■□□□□ 0.12
PTPRA-205ENST00000399903 PSMB10P40306 273 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 POLR2LP62875 67 aaKnown RBP15.81■□□□□ 0.12
PTPRA-205ENST00000399903 HTRA4P83105 476 aaPredicted RBP15.81■□□□□ 0.12
PTPRA-205ENST00000399903 C4orf46Q504U0 113 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 ZNF660Q6AZW8 331 aaPredicted RBP15.81■□□□□ 0.12
PTPRA-205ENST00000399903 CCDC116Q8IYX3 515 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 SMIM4Q8WVI0 70 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 SLC25A28Q96A46 364 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 ZNF649Q9BS31 505 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 IL36AQ9UHA7 158 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 CAMK2AQ9UQM7 478 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 LINC01553A4QN01 128 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 KRT33AO76009 404 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 EPXP11678 715 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 NDUFV2P19404 249 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 NAA10P41227 235 aaPredicted RBP15.81■□□□□ 0.12
PTPRA-205ENST00000399903 FGL1Q08830 312 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 FZD5Q13467 585 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 DCAF12L2Q5VW00 463 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 CDH26Q8IXH8 852 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 AMER3Q8N944 861 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 FCAMRQ8WWV6 532 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 OTUB2Q96DC9 234 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 ENKD1Q9H0I2 346 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 DNTTIP1Q9H147 329 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 ACAD8Q9UKU7 415 aa15.81■□□□□ 0.12
PTPRA-205ENST00000399903 PYCARD-AS1I3L0S3 204 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 HMGN2P05204 90 aaKnown RBP15.8■□□□□ 0.12
PTPRA-205ENST00000399903 STAT5AP42229 794 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 MEOX2P50222 304 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 GMFBP60983 142 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 ST3GAL3Q11203 375 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 NXPE4Q6UWF7 544 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 GLDNQ6ZMI3 551 aaPredicted RBP15.8■□□□□ 0.12
PTPRA-205ENST00000399903 OR8S1Q8NH09 359 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 OR51A7Q8NH64 312 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 MCHR1Q99705 422 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 CPEB1Q9BZB8 566 aaKnown RBP15.8■□□□□ 0.12
PTPRA-205ENST00000399903 OR2AG1Q9H205 316 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 UBQLN3Q9H347 655 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 IGFLR1Q9H665 355 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 NEUROD4Q9HD90 331 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 AHSPQ9NZD4 102 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 DOCK9Q9BZ29 2069 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 PTPRSQ13332 1948 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 ACOD1A6NK06 481 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 PRAMEF2O60811 474 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 TGM6O95932 706 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 SERPINA3P01011 423 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 RD3LP0DJH9 198 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 IFNGR1P15260 489 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 BMP7P18075 431 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 MAT2AP31153 395 aaKnown RBP15.8■□□□□ 0.12
PTPRA-205ENST00000399903 POLR2GP62487 172 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTPRA-205ENST00000399903 FNDC3BQ53EP0 1204 aaKnown RBP15.8■□□□□ 0.12
PTPRA-205ENST00000399903 HSD17B13Q7Z5P4 300 aaPredicted RBP15.8■□□□□ 0.12
PTPRA-205ENST00000399903 LRRC56Q8IYG6 542 aaPredicted RBP15.8■□□□□ 0.12
PTPRA-205ENST00000399903 SYNPO2LQ9H987 977 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 SIRT3Q9NTG7 399 aaPredicted RBP15.8■□□□□ 0.12
PTPRA-205ENST00000399903 NPTNQ9Y639 398 aa15.8■□□□□ 0.12
PTPRA-205ENST00000399903 PRAF2O60831 178 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 SLCO2B1O94956 709 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 RASGRP1O95267 797 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 APOC1P02654 83 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 H2BFSP57053 126 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 TMEM69Q5SWH9 247 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 OR7E24Q6IFN5 339 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 RFLNBQ8N5W9 214 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 NSMAFQ92636 917 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 TM4SF18Q96CE8 201 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 ZNF471Q9BX82 626 aaPredicted RBP15.79■□□□□ 0.12
PTPRA-205ENST00000399903 FKRPQ9H9S5 495 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 RNF215Q9Y6U7 377 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 KIAA1671Q9BY89 1806 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 DENND4CQ5VZ89 1909 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 A0A1B0GUH1 482 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 IGHA1P01876 353 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 HIST1H2ABP04908 130 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 CA3P07451 260 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 SAGP10523 405 aaPredicted RBP15.79■□□□□ 0.12
PTPRA-205ENST00000399903 HOXA1P49639 335 aaPredicted RBP15.79■□□□□ 0.12
PTPRA-205ENST00000399903 C9orf64Q5T6V5 341 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 HIST3H2AQ7L7L0 130 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 SLC44A3Q8N4M1 653 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 LINC00471Q8N535 108 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 VN1R2Q8NFZ6 395 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 OR52L1Q8NGH7 329 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 OR5M9Q8NGP3 310 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 HIST1H2ACQ93077 130 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 CACYBPQ9HB71 228 aaKnown RBP15.79■□□□□ 0.12
PTPRA-205ENST00000399903 KLHL9Q9P2J3 617 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 TAC3Q9UHF0 121 aa15.79■□□□□ 0.12
PTPRA-205ENST00000399903 F5H5P2 479 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms