RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 THAP3Q8WTV1 239 aaPredicted RBP13.88□□□□□ -0.19
COL25A1-201ENST00000399126 FRG2CA6NGY1 282 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 MEN1O00255 615 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 TLX2O43763 284 aaPredicted RBP13.88□□□□□ -0.19
COL25A1-201ENST00000399126 FMO6PO60774 539 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 ICOSLGO75144 302 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 UTS2O95399 124 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 LCKP06239 509 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 GUSBP08236 651 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 FPR3P25089 353 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 CBX5P45973 191 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 IGFN1Q86VF2 1251 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 SPSB2Q99619 263 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 TUBA1CQ9BQE3 449 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 ENKD1Q9H0I2 346 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 SP140LQ9H930 580 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 TMEM27Q9HBJ8 222 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 COPS7AQ9UBW8 275 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 CORINQ9Y5Q5 1042 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 AHCTF1Q8WYP5 2266 aa13.88□□□□□ -0.19
COL25A1-201ENST00000399126 REM1O75628 298 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 IFI30P13284 250 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ITIH1P19827 911 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 GSTM3P21266 225 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 IFNGR2P38484 337 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 FXYD6P3P58550 94 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 RASSF6Q6ZTQ3 369 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 PRSS48Q7RTY5 328 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 OVCH1Q7RTY7 1134 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 OR4Q3Q8NH05 313 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 RADILQ96JH8 1075 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ZNF559Q9BR84 538 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ACOT13Q9NPJ3 140 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 PLCXD1Q9NUJ7 323 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 OTOGLQ3ZCN5 2332 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 PMS2P1A4D2B8 440 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ZNF354AO60765 605 aaPredicted RBP13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ATE1O95260 518 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 FGF5P12034 268 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ST3GAL4Q11206 333 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ALG10BQ5I7T1 473 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 PLA2G2CQ5R387 149 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ZNF620Q6ZNG0 422 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 APCDD1LQ8NCL9 501 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 AGBL5Q8NDL9 886 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ZNF420Q8TAQ5 688 aaPredicted RBP13.87□□□□□ -0.19
COL25A1-201ENST00000399126 TEX47Q8TBZ9 253 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 TTC9Q92623 222 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 FKBP10Q96AY3 582 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 WARS2Q9UGM6 360 aaKnown RBP13.87□□□□□ -0.19
COL25A1-201ENST00000399126 PCDHGB1Q9Y5G3 927 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 H3BMQ9 156 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ALOX12BO75342 701 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 NR4A2P43354 598 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 DOC2BQ14184 412 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 FNDC7Q5VTL7 733 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ZNF613Q6PF04 617 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 DBX2Q6ZNG2 339 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 AKAP14Q86UN6 197 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 PHOSPHO1Q8TCT1 267 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 WDR77Q9BQA1 342 aaPredicted RBP13.87□□□□□ -0.19
COL25A1-201ENST00000399126 TSSK6Q9BXA6 273 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 UBQLN4Q9NRR5 601 aa13.87□□□□□ -0.19
COL25A1-201ENST00000399126 ZNF99A8MXY4 864 aaPredicted RBP13.86□□□□□ -0.19
COL25A1-201ENST00000399126 CDK1P06493 297 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 HPGDP15428 266 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 DCKP27707 260 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 ABCD3P28288 659 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 CCR4P51679 360 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 BLVRAP53004 296 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 SNAPC1Q16533 368 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 HLA-DQA1Q5Y7H0 255 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 SLC27A4Q6P1M0 643 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 HSDL2Q6YN16 418 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 SLCO6A1Q86UG4 719 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 OR8J1Q8NGP2 316 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 OR13C2Q8NGS9 318 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 TRIM63Q969Q1 353 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 SH3YL1Q96HL8 342 aaPredicted RBP13.86□□□□□ -0.19
COL25A1-201ENST00000399126 SAMD8Q96LT4 415 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 CLN6Q9NWW5 311 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 VSTM2BA6NLU5 285 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 CDX4O14627 284 aaPredicted RBP13.86□□□□□ -0.19
COL25A1-201ENST00000399126 CHP2O43745 196 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 SLC2A10O95528 541 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 ACP1P24666 158 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 PSMB9P28065 219 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 EMP2P54851 167 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 SNRPGP62308 76 aaKnown RBP13.86□□□□□ -0.19
COL25A1-201ENST00000399126 PLCXD2Q0VAA5 305 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 SLC29A4Q7RTT9 530 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 ZNF441Q8N8Z8 693 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 DTX3Q8N9I9 347 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 NFAM1Q8NET5 270 aaPredicted RBP13.86□□□□□ -0.19
COL25A1-201ENST00000399126 FGF11Q92914 225 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 LRR1Q96L50 414 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 FUNDC2Q9BWH2 189 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 OR2B2Q9GZK3 357 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 CCNB1IP1Q9NPC3 277 aa13.86□□□□□ -0.19
COL25A1-201ENST00000399126 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms