RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GEMIN6Q8WXD5 167 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PYURFQ96I23 114 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TUBA1CQ9BQE3 449 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TRIM2Q9C040 744 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 OR11A1Q9GZK7 315 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CHRNA9Q9UGM1 479 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PRDM4Q9UKN5 801 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ACAD8Q9UKU7 415 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 A4GNTQ9UNA3 340 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SAMD4AQ9UPU9 718 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CAMK2AQ9UQM7 478 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SLC9A8Q9Y2E8 581 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TMED7Q9Y3B3 224 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 A0A1W2PNR3 127 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ADAMDEC1O15204 470 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SEC14L5O43304 696 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 UQCRBP14927 111 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 KLK2P20151 261 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SFTPDP35247 375 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 HTR3AP46098 478 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 YAP1P46937 504 aaKnown RBP11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 COPZ1P61923 177 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 KCNC4Q03721 635 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SRYQ05066 204 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 EGR4Q05215 589 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PIN1Q13526 163 aaPredicted RBP11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TMEM176BQ3YBM2 270 aaPredicted RBP11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SYT14P1Q58G82 188 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 WLSQ5T9L3 541 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ZNF585AQ6P3V2 769 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ZNF613Q6PF04 617 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 LINC00114Q6XXX2 140 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 DEF8Q6ZN54 512 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 FKBP9P1Q75LS8 142 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 YTHDF3Q7Z739 585 aaKnown RBP11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ATCAYQ86WG3 371 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ADGRG5Q8IZF4 528 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ADAMTS16Q8TE57 1224 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 LZICQ8WZA0 190 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 MCUR1Q96AQ8 359 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 DNAJA3Q96EY1 480 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ZNF845Q96IR2 970 aaPredicted RBP11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ARL5BQ96KC2 179 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 KLHL15Q96M94 604 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PRSS27Q9BQR3 290 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SRXN1Q9BYN0 137 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 MAN2C1Q9NTJ4 1040 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 NDUFAF4Q9P032 175 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SH3BGRL2Q9UJC5 107 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ARHGAP21Q5T5U3 1957 aa11.15□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PHF3Q92576 2039 aaKnown RBP11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 A0A087WUJ7 227 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TRGV8A0A0C4DH27 118 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TRAPPC13A5PLN9 417 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 hCG_2039718K7EN88 272 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 EIF1AYO14602 144 aaKnown RBP11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PRRG2O14669 202 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TNFSF11O14788 317 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ZNF208O43345 1280 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 GMNNO75496 209 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 IFNW1P05000 195 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 IMPDH2P12268 514 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PTNP21246 168 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 GCKP35557 465 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SRSF1Q07955 248 aaKnown RBP eCLIP11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MTX3Q5HYI7 312 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ALG10BQ5I7T1 473 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ULK3Q6PHR2 472 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ESPNLQ6ZVH7 1005 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 GDF7Q7Z4P5 450 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 NKAIN4Q8IVV8 208 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PM20D2Q8IYS1 436 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 OR10D3Q8NH80 312 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 OR2V1Q8NHB1 315 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ZPLD1Q8TCW7 415 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SLC25A43Q8WUT9 341 aaPredicted RBP11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SLC38A4Q969I6 547 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SLC41A3Q96GZ6 507 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PRRC1Q96M27 445 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 DMRTA2Q96SC8 542 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ZNF426Q9BUY5 554 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PTDSS2Q9BVG9 487 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 C12orf10Q9HB07 376 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TMEM27Q9HBJ8 222 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CLCF1Q9UBD9 225 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SLC7A7Q9UM01 511 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ENPP4Q9Y6X5 453 aa11.14□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FLNCQ14315 2725 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CLCA1A8K7I4 914 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 AHRRA9YTQ3 701 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 H0Y3Z8 333 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CHP2O43745 196 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CXCL13O43927 109 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 WDR1O75083 606 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TOXO94900 526 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 DIRAS1O95057 198 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 OR5F1O95221 314 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MT-ND1P03886 318 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ACVR2AP27037 513 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MAGEA2P43356 314 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms