RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 ATG4DQ86TL0 474 aaPredicted RBP13.74□□□□□ -0.21
SUMO3-203ENST00000397898 GALNT4Q8N4A0 578 aa13.74□□□□□ -0.21
SUMO3-203ENST00000397898 OR52J3Q8NH60 311 aa13.74□□□□□ -0.21
SUMO3-203ENST00000397898 UBL7Q96S82 380 aaPredicted RBP13.74□□□□□ -0.21
SUMO3-203ENST00000397898 TSPAN10Q9H1Z9 355 aaPredicted RBP13.74□□□□□ -0.21
SUMO3-203ENST00000397898 C12orf10Q9HB07 376 aa13.74□□□□□ -0.21
SUMO3-203ENST00000397898 TLN1Q9Y490 2541 aaKnown RBP13.74□□□□□ -0.21
SUMO3-203ENST00000397898 EPG5Q9HCE0 2579 aa13.74□□□□□ -0.21
SUMO3-203ENST00000397898 OR2M5A3KFT3 312 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 GNGT2O14610 69 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 GADD45GO95257 159 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 PNMTP11086 282 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 ZNF23P17027 643 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 CXCR1P25024 350 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 B3GALT5-AS1P59052 145 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 PPP4R4Q6NUP7 873 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 WDR88Q6ZMY6 472 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 ADGRG3Q86Y34 549 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 NKAIN4Q8IVV8 208 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 SIAH3Q8IW03 269 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 DHRS1Q96LJ7 313 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 SFXN2Q96NB2 322 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 PRSS27Q9BQR3 290 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 SLC6A15Q9H2J7 730 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 NTN4Q9HB63 628 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 A0A087WUJ7 227 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 TMED7-TICAM2A0A0A6YYA0 188 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 A0A1W2PRQ8 180 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 ELOA3DA6NLF2 546 aaPredicted RBP13.73□□□□□ -0.21
SUMO3-203ENST00000397898 SOCS2O14508 198 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 EFNA2O43921 213 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 CCNA2P20248 432 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 IL11P20809 199 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 GFRA1P56159 465 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 SMIM11AP58511 58 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 DGCR6Q14129 220 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 TRAM2Q15035 370 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 ELOA3BQ3SY89 546 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 LINC00114Q6XXX2 140 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 CBR4Q8N4T8 237 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 CISD2Q8N5K1 135 aaKnown RBP13.73□□□□□ -0.21
SUMO3-203ENST00000397898 ELOA3Q8NG57 546 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 MPP4Q96JB8 637 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 SLC29A1Q99808 456 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 ANKRD19PQ9H560 264 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 LDAHQ9H6V9 325 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 REEP1Q9H902 201 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 VNN3Q9NY84 501 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 CHRNA9Q9UGM1 479 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 RAB26Q9ULW5 256 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 SLC6A5Q9Y345 797 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 TMED7Q9Y3B3 224 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 LIPGQ9Y5X9 500 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 LYVE1Q9Y5Y7 322 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 U3KQV3 271 aa13.73□□□□□ -0.21
SUMO3-203ENST00000397898 NPIPA5E9PKD4 350 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 SUSD5O60279 629 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 RPSAP08865 295 aaKnown RBP13.72□□□□□ -0.21
SUMO3-203ENST00000397898 ELK4P28324 431 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 PPP1R8Q12972 351 aaKnown RBP13.72□□□□□ -0.21
SUMO3-203ENST00000397898 FGD3Q5JSP0 725 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 SLC7A13Q8TCU3 470 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 TMEM255BQ8WV15 326 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 Q9H521 79 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 SERINC1Q9NRX5 453 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 NPIPA1Q9UND3 350 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 ZNF337Q9Y3M9 751 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 SAMHD1Q9Y3Z3 626 aaKnown RBP13.72□□□□□ -0.21
SUMO3-203ENST00000397898 CACNA1BQ00975 2339 aa13.72□□□□□ -0.21
SUMO3-203ENST00000397898 TRGV5A0A0B4J1U4 118 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 TRBV4-1A0A0J9YWV2 114 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 TMEM72A0PK05 275 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 PDLIM1O00151 329 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 TNFRSF11BO00300 401 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 WISP2O76076 250 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 IGHG3P01860 377 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 PEPDP12955 493 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 PTNP21246 168 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 HMGA2P52926 109 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 IST1P53990 364 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 SELENBP1Q13228 472 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.71□□□□□ -0.214e-7■□□□□ 10.1
SUMO3-203ENST00000397898 C3orf33Q6P1S2 294 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 TRILQ7L0X0 811 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 SVOPLQ8N434 492 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 ATP6V1C2Q8NEY4 427 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 NEIL3Q8TAT5 605 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 SNRNP40Q96DI7 357 aaKnown RBP13.71□□□□□ -0.21
SUMO3-203ENST00000397898 ZNF426Q9BUY5 554 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 TMEM185BQ9H7F4 350 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 ATRXP46100 2492 aa13.71□□□□□ -0.21
SUMO3-203ENST00000397898 H3BML4 177 aa13.71□□□□□ -0.22
SUMO3-203ENST00000397898 LINC01387J3KSC0 135 aa13.71□□□□□ -0.22
SUMO3-203ENST00000397898 EI24O14681 340 aa13.71□□□□□ -0.22
SUMO3-203ENST00000397898 HCN1O60741 890 aa13.71□□□□□ -0.22
SUMO3-203ENST00000397898 CHMP24386 653 aa13.71□□□□□ -0.22
SUMO3-203ENST00000397898 LIMS1P48059 325 aa13.71□□□□□ -0.22
SUMO3-203ENST00000397898 MAP2K6P52564 334 aa13.71□□□□□ -0.22
SUMO3-203ENST00000397898 EXOC3L2Q2M3D2 409 aa13.71□□□□□ -0.22
SUMO3-203ENST00000397898 DCST1Q5T197 706 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms