RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ANK2Q01484 3957 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 CR1P17927 2039 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 CIB4A0PJX0 185 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 SERINC4A6NH21 518 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 DUXAA6NLW8 204 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 CCT8L1PA6NM43 557 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 H7C417 338 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 SULT2B1O00204 365 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 LSM1O15116 133 aaKnown RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 LYPLA1O75608 230 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 C8BP07358 591 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 CSF3P09919 207 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 LAMP1P11279 417 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 UBL4AP11441 157 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 PGCP20142 388 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 EFNA1P20827 205 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 USF1P22415 310 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 EDNRAP25101 427 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 CD40P25942 277 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 MAPK1P28482 360 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 HPCAL1P37235 193 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 APOBEC1P41238 236 aaKnown RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 CLK1P49759 484 aaKnown RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 GZMKP49863 264 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 DIO1P49895 249 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF83P51522 516 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 EFNA4P52798 201 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 CASP9P55211 416 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 SESN3P58005 492 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 RPL38P63173 70 aaKnown RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 CHRNEQ04844 493 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 LIPMQ5VYY2 423 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 AP1ARQ63HQ0 302 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 BHLHB9Q6PI77 547 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 IFT20Q8IY31 132 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 UBE2J2Q8N2K1 259 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 OR7A2PQ8NGA2 310 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 RFWD2Q8NHY2 731 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 C10orf105Q8TEF2 133 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 UBASH3BQ8TF42 649 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 SLC25A43Q8WUT9 341 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 OIT3Q8WWZ8 545 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 TMEM234Q8WY98 164 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 COQ8BQ96D53 544 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 OR5B2Q96R09 309 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF300Q96RE9 604 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 SDF2Q99470 211 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 PRPF18Q99633 342 aaKnown RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 THUMPD3Q9BV44 507 aaKnown RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 NMUR2Q9GZQ4 415 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 TUBB1Q9H4B7 451 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 ANKZF1Q9H8Y5 726 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 ATAD3AQ9NVI7 634 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 ASB6Q9NWX5 421 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 NOSIPQ9Y314 301 aaKnown RBP7.7□□□□□ -1.18
CAPN3-208ENST00000397204 DNAJC15Q9Y5T4 150 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 PTGDR2Q9Y5Y4 395 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 SLC25A15Q9Y619 301 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 KCNE3Q9Y6H6 103 aa7.7□□□□□ -1.18
CAPN3-208ENST00000397204 NPIPA5A0A0B4J1W7 369 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 NPIPA7E9PJI5 369 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 COPEO14579 308 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 ANKRD28O15084 1053 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 SCAMP2O15127 329 aaKnown RBP7.69□□□□□ -1.18
CAPN3-208ENST00000397204 DNPH1O43598 174 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 LMX1BO60663 402 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 TRIM13O60858 407 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 MRPL33O75394 65 aaKnown RBP7.69□□□□□ -1.18
CAPN3-208ENST00000397204 H6PDO95479 791 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 AK1P00568 194 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 NPIPA8P0DM63 369 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 PRPS1L1P21108 318 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 APOBEC3AP31941 199 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-208ENST00000397204 SKP2Q13309 424 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF141Q15928 474 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 GABRA6Q16445 453 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 NDUFAF6Q330K2 333 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 KRTAP24-1Q3LI83 254 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 UGT3A2Q3SY77 523 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 SPDYE7PQ495Y7 208 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 GALNTL6Q49A17 601 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 KANK2Q63ZY3 851 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 EIF3MQ7L2H7 374 aaKnown RBP7.69□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF525Q8N782 197 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF614Q8N883 585 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 CCDC63Q8NA47 563 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 OR52N5Q8NH56 324 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 SFXN5Q8TD22 340 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 APH1AQ96BI3 265 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 ZHX1-C8orf76Q96EF9 292 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 PPP3R2Q96LZ3 170 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 OR7D2Q96RA2 312 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 INPP5KQ9BT40 448 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 GATA5Q9BWX5 397 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-208ENST00000397204 BHLHE41Q9C0J9 482 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-208ENST00000397204 QRSL1Q9H0R6 528 aaKnown RBP7.69□□□□□ -1.18
CAPN3-208ENST00000397204 FKRPQ9H9S5 495 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 ACER3Q9NUN7 267 aa7.69□□□□□ -1.18
CAPN3-208ENST00000397204 PARPBPQ9NWS1 579 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms