RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PDE7AQ13946 482 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 CCNIQ14094 377 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 C3orf36Q3SXR2 165 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 DCST2Q5T1A1 773 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 TSPO2Q5TGU0 170 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 CDC73Q6P1J9 531 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 SHISA2Q6UWI4 295 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 CASP12Q6UXS9 341 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 CCDC103Q8IW40 242 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 TMCO5AQ8N6Q1 288 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 JADE3Q92613 823 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 TMEM186Q96B77 213 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 PPCDCQ96CD2 204 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 NAPGQ99747 312 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-202ENST00000396629 GSTO2Q9H4Y5 243 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 OBP2BQ9NPH6 170 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 PARPBPQ9NWS1 579 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 CRNNQ9UBG3 495 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-202ENST00000396629 UTP11Q9Y3A2 253 aaKnown RBP7.32□□□□□ -1.24
SCFD1-202ENST00000396629 CCL27Q9Y4X3 112 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 KCNE3Q9Y6H6 103 aa7.32□□□□□ -1.24
SCFD1-202ENST00000396629 NUP214P35658 2090 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-202ENST00000396629 CMYA5Q8N3K9 4069 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 TMEM129A0AVI4 362 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 TRIM49D1C9J1S8 452 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 RGS9O75916 674 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-202ENST00000396629 URI1O94763 535 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-202ENST00000396629 ERCC1P07992 297 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-202ENST00000396629 IFNGR1P15260 489 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 PRPH2P23942 346 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 ATP5F1P24539 256 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-202ENST00000396629 CCR4P51679 360 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 H3F3AP84243 136 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 MERTKQ12866 999 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 SKP2Q13309 424 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 LASP1Q14847 261 aaKnown RBP7.31□□□□□ -1.24
SCFD1-202ENST00000396629 KLHL24Q6TFL4 600 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 SLC22A9Q8IVM8 553 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 LRRC17Q8N6Y2 441 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 SPATA4Q8NEY3 305 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 OR4F15Q8NGB8 312 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 WDR60Q8WVS4 1066 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 TMEM234Q8WY98 164 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 ARL5BQ96KC2 179 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 FCRL1Q96LA6 429 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 KCNS3Q9BQ31 491 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 ACTRT3Q9BYD9 372 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 ZCCHC3Q9NUD5 404 aaKnown RBP7.31□□□□□ -1.24
SCFD1-202ENST00000396629 HIF1ANQ9NWT6 349 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 NINJ2Q9NZG7 142 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 TMEM216Q9P0N5 145 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 SH3BP4Q9P0V3 963 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 USP22Q9UPT9 525 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 SLC9A8Q9Y2E8 581 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 HDGFL3Q9Y3E1 203 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 GRIP1Q9Y3R0 1128 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 PCDHGB1Q9Y5G3 927 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 FLVCR1Q9Y5Y0 555 aa7.31□□□□□ -1.24
SCFD1-202ENST00000396629 hCG_2039718K7EN88 272 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 AKAP10O43572 662 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 CRYAAP02489 173 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 TFPIP10646 304 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 DDX5P17844 614 aaKnown RBP7.3□□□□□ -1.24
SCFD1-202ENST00000396629 EPHA1P21709 976 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 APOBEC1P41238 236 aaKnown RBP7.3□□□□□ -1.24
SCFD1-202ENST00000396629 CLK1P49759 484 aaKnown RBP7.3□□□□□ -1.24
SCFD1-202ENST00000396629 NAAAQ02083 359 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 HIKESHIQ53FT3 197 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 ZCCHC24Q8N2G6 241 aaKnown RBP7.3□□□□□ -1.24
SCFD1-202ENST00000396629 SVOPLQ8N434 492 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 ZNF614Q8N883 585 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 NUP37Q8NFH4 326 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 CHMP6Q96FZ7 201 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 PAFAH2Q99487 392 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 CCDC106Q9BWC9 280 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 RACGAP1Q9H0H5 632 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 RAB17Q9H0T7 212 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 ZNF442Q9H7R0 627 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 MID1IP1Q9NPA3 183 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 RRAGDQ9NQL2 400 aaPredicted RBP7.3□□□□□ -1.24
SCFD1-202ENST00000396629 ZNF180Q9UJW8 692 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 TRAPPC4Q9Y296 219 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 SPIN1Q9Y657 262 aaPredicted RBP7.3□□□□□ -1.24
SCFD1-202ENST00000396629 LYNX1G3V0Z9 82 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 KLF11O14901 512 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 SEC22BO75396 215 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 MSMBP08118 114 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 LYNX1P0DP58 116 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 FKBP2P26885 142 aaKnown RBP7.3□□□□□ -1.24
SCFD1-202ENST00000396629 CALCRP30988 508 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 SLC1A3P43003 542 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 ASMTP46597 345 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 HGFACQ04756 655 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 SLC17A1Q14916 467 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 ZNF141Q15928 474 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 ADRM1Q16186 407 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 PDZK1Q5T2W1 519 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 ANKRD16Q6P6B7 361 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 VHLLQ6RSH7 139 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 TREML4Q6UXN2 200 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms