RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 GATBO75879 557 aaKnown RBP12.3□□□□□ -0.44
TRIM40-207ENST00000396581 SNAPC5O75971 98 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 STATHP02808 62 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 MT-ND4P03905 459 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF19P17023 458 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 NDUFS1P28331 727 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 LCN1P31025 176 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 ACVR1BP36896 505 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 P2RY2P41231 377 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 SELENOPP49908 381 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 FAAH2Q6GMR7 532 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 RPTNQ6XPR3 784 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 SLITRK4Q8IW52 837 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 MFSD9Q8NBP5 474 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 BEST4Q8NFU0 473 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 OR11G2Q8NGC1 345 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 ZFP3Q96NJ6 502 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 ERMAPQ96PL5 475 aaPredicted RBP12.3□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF350Q9GZX5 532 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 RSPH9Q9H1X1 276 aaPredicted RBP12.3□□□□□ -0.44
TRIM40-207ENST00000396581 RPS6KB2Q9UBS0 482 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 POMT2Q9UKY4 750 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 CENPVL1A0A0U1RR11 272 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 A0A1B0GUH1 482 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 TRIM77I1YAP6 450 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 FLRT2O43155 660 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 TMEM127O75204 238 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 ARL6IP5O75915 188 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 NOS3P29474 1203 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 GDNFP39905 211 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 RPS11P62280 158 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRIM40-207ENST00000396581 POU6F2P78424 691 aaPredicted RBP12.3□□□□□ -0.44
TRIM40-207ENST00000396581 OR1Q1Q15612 314 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 NHLRC3Q5JS37 347 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 UNQ9370/PRO34162Q6UXP9 181 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 SSX6Q7RTT6 188 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 PRSS42Q7Z5A4 293 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 SYS1Q8N2H4 156 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 SLC43A2Q8N370 569 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 OR2T35Q8NGX2 323 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 CEP76Q8TAP6 659 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 SMIM19Q96E16 107 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 MSANTD3Q96H12 275 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 SDF2Q99470 211 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 TEX101Q9BY14 249 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 XKR8Q9H6D3 395 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 MED9Q9NWA0 146 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 FBXL3Q9UKT7 428 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 BAIAP2Q9UQB8 552 aa12.3□□□□□ -0.44
TRIM40-207ENST00000396581 TMEM265A0A087WTH1 108 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 A0A1W2PPL8 197 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 NAP1L6A6NFF2 107 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 PRR19A6NJB7 356 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 SSNA1O43805 119 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 PRG2P13727 222 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 PYCR1P32322 319 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 DRD3P35462 400 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 CCR9P51686 369 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 VSX2P58304 361 aaPredicted RBP12.29□□□□□ -0.44
TRIM40-207ENST00000396581 SRP54P61011 504 aaKnown RBP12.29□□□□□ -0.44
TRIM40-207ENST00000396581 CDK5R1Q15078 307 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 UBE2NLQ5JXB2 153 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF425Q6IV72 752 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 SPICQ8N5J4 248 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 EID2Q8N6I1 236 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 OR2L3Q8NG85 312 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 OR13C5Q8NGS8 318 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 LHFPL5Q8TAF8 219 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 PHYHIPQ92561 330 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 RBPMSQ93062 196 aaKnown RBP12.29□□□□□ -0.44
TRIM40-207ENST00000396581 PEX11GQ96HA9 241 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 OR51V1Q9H2C8 321 aa12.29□□□□□ -0.44
TRIM40-207ENST00000396581 METTL17Q9H7H0 456 aaPredicted RBP12.29□□□□□ -0.44
TRIM40-207ENST00000396581 CACYBPQ9HB71 228 aaKnown RBP12.29□□□□□ -0.44
TRIM40-207ENST00000396581 A0A0B4J203 849 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 OR6C65A6NJZ3 312 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 M0R233 179 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 PCCBP05166 539 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 MRPL3P09001 348 aaKnown RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 HOXD4P09016 255 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CLUP10909 449 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 NID1P14543 1247 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CPN1P15169 458 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 NAGAP17050 411 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CTRB1P17538 263 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 PEBP1P30086 187 aaKnown RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CTHP32929 405 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 MECP2P51608 486 aaKnown RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 BLVRAP53004 296 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CLDN2P57739 230 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 RAB14P61106 215 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CRYZQ08257 329 aaKnown RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CRMP1Q14194 572 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CST6Q15828 149 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 DUSP5Q16690 384 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 METTL11BQ5VVY1 283 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CTRB2Q6GPI1 263 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF619Q8N2I2 560 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 LRRC25Q8N386 305 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms