RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 FAM228AQ86W67 206 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 PSTKQ8IV42 348 aaKnown RBP3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 ALLCQ8N6M5 410 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 OR1L4Q8NGR5 311 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 FAF2Q96CS3 445 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 C10orf35Q96D05 121 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 LRRC39Q96DD0 335 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 IFT74Q96LB3 600 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 CATSPER2Q96P56 530 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 BCL7BQ9BQE9 202 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 RIOK1Q9BRS2 568 aaKnown RBP3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 SLC35A5Q9BS91 424 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 MTG1Q9BT17 334 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 DPH7Q9BTV6 452 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 POPDC2Q9HBU9 364 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 MIEF1Q9NQG6 463 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 B3GNT2Q9NY97 397 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 MTRF1LQ9UGC7 380 aaKnown RBP3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 ERVW-1Q9UQF0 538 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 CNTNAP2Q9UHC6 1331 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 BRD4O60885 1362 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 IGHV3-35A0A0C4DH35 117 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 A0A1W2PPE3 182 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 GOLGA8OA6NCC3 632 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 A8MX80 341 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF879B4DU55 563 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 GOLGA8NF8WBI6 632 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 MED7O43513 233 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 PRKYO43930 277 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 DIRAS1O95057 198 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 KRT14P02533 472 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 FGF4P08620 206 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 H2AFZP0C0S5 128 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 SLC35E2P0CK97 266 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 RNF224P0DH78 156 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 ANXA8P13928 327 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 POLR2EP19388 210 aaKnown RBP3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 MT3P25713 68 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 BMI1P35226 326 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 MAP3K8P41279 467 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 PRKXP51817 358 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 CTAG1AP78358 180 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 CXCL6P80162 114 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 CTSL3PQ5NE16 218 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 C1orf220Q5T0J3 134 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 ANXA8L1Q5VT79 327 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 LIPNQ5VXI9 398 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF772Q68DY9 489 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 ERICH5Q6P6B1 374 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 VITQ6UXI7 678 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 CENPQQ7L2Z9 268 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 NANOGNBQ7Z5D8 188 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 COMTD1Q86VU5 262 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 CDR2LQ86X02 465 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 SLC35F2Q8IXU6 374 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 POM121L12Q8N7R1 296 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 ACMSDQ8TDX5 336 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 TFB1MQ8WVM0 346 aaKnown RBP3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 NOL4LQ96MY1 436 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 TBX15Q96SF7 602 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 COPS8Q99627 209 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 TSSK1BQ9BXA7 367 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 NSRP1Q9H0G5 558 aaKnown RBP3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 AZI2Q9H6S1 392 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 ETNK2Q9NVF9 386 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 PAK5Q9P286 719 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 IFT52Q9Y366 437 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 COMMD3-BMI1R4GMX3 469 aa3.85□□□□□ -1.79
HMGB1P10-201ENST00000395823 PCP4L1A6NKN8 68 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 F5H6K3 240 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 GOLGA8SH3BPF8 625 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 NVLO15381 856 aaKnown RBP3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 YKT6O15498 198 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF354AO60765 605 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 GAPDHP04406 335 aaKnown RBP3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 SLC2A3P11169 496 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 ETS2P15036 469 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 MX1P20591 662 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 CCR1P32246 355 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 LEPP41159 167 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 QARSP47897 775 aaKnown RBP3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 FNTAP49354 379 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 SUCLG1P53597 346 aaKnown RBP3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 CDH4P55283 916 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 RIPK4P57078 832 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 SLC8A3P57103 927 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 KLRC3Q07444 240 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 ARHGAP19Q14CB8 494 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 SLC15A2Q16348 729 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 GLYR1Q49A26 553 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 PDPK2PQ6A1A2 396 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 C8orf74Q6P047 294 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 TRIM69Q86WT6 500 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 FAM9CQ8IZT9 166 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 TTC5Q8N0Z6 440 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 UBE2J2Q8N2K1 259 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 OR9K2Q8NGE7 335 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 LILRB4Q8NHJ6 448 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 CCDC26Q8TAB7 109 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 PAQR8Q8TEZ7 354 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms