RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 CMC2Q9NRP2 79 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 LOXL2Q9Y4K0 774 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 EXPH5Q8NEV8 1989 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 CBFA2T3O75081 653 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 PGCP20142 388 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 FOXK2Q01167 660 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 ARMCX4Q5H9R4 360 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 C3orf38Q5JPI3 329 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 DCAF12Q5T6F0 453 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 CXXC5Q7LFL8 322 aaKnown RBP19.49■□□□□ 0.71
SPHK1-202ENST00000392496 SLC46A3Q7Z3Q1 461 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 GID4Q8IVV7 300 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 PROKR2Q8NFJ6 384 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 MND1Q9BWT6 205 aa19.49■□□□□ 0.71
SPHK1-202ENST00000392496 H2AFY2Q9P0M6 372 aaPredicted RBP19.49■□□□□ 0.71
SPHK1-202ENST00000392496 LSM2Q9Y333 95 aaKnown RBP19.49■□□□□ 0.71
SPHK1-202ENST00000392496 OR7A10O76100 309 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 NDUFB2O95178 105 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 NR4A1P22736 598 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 HTR1FP30939 366 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 P2RX1P51575 399 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 ROR2Q01974 943 aaKnown RBP19.48■□□□□ 0.71
SPHK1-202ENST00000392496 PCOLCEQ15113 449 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 MED22Q15528 200 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 C16orf47Q6ZP98 133 aaPredicted RBP19.48■□□□□ 0.71
SPHK1-202ENST00000392496 CPOQ8IVL8 374 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 NANOGP1Q8N7R0 232 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 THAP3Q8WTV1 239 aaPredicted RBP19.48■□□□□ 0.71
SPHK1-202ENST00000392496 LIPHQ8WWY8 451 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 TMCO6Q96DC7 493 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 OR5M11Q96RB7 305 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 MGLLQ99685 303 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 ZPBPQ9BS86 351 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 PTRH2Q9Y3E5 179 aaKnown RBP19.48■□□□□ 0.71
SPHK1-202ENST00000392496 ZNF337Q9Y3M9 751 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 B3GALT1Q9Y5Z6 326 aa19.48■□□□□ 0.71
SPHK1-202ENST00000392496 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.47■□□□□ 0.71
SPHK1-202ENST00000392496 WWP2O00308 870 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 SCO2O43819 266 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 ZNF354AO60765 605 aaPredicted RBP19.47■□□□□ 0.71
SPHK1-202ENST00000392496 KLF7O75840 302 aaPredicted RBP19.47■□□□□ 0.71
SPHK1-202ENST00000392496 BCL10O95999 233 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 UMODP07911 640 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 ITPKBP27987 946 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 TACR3P29371 465 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 CBFBQ13951 182 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 NUP54Q7Z3B4 507 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 CACTIN-AS1Q8N1I8 211 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 GALNT6Q8NCL4 622 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 HGDQ93099 445 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 CLEC2DQ9UHP7 191 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 M0R3G1 203 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 ADAM10O14672 748 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 CDC40O60508 579 aaKnown RBP eCLIP19.47■□□□□ 0.71
SPHK1-202ENST00000392496 CD63P08962 238 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 PEPDP12955 493 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 ETV5P41161 510 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 SPCS2Q15005 226 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 OR2Y1Q8NGV0 311 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 ELP5Q8TE02 316 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 TTC9Q92623 222 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 ZNF524Q96C55 264 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 DEPDC7Q96QD5 511 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 KLHDC3Q9BQ90 382 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 TAPBPLQ9BX59 468 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 TIMMDC1Q9NPL8 285 aa19.47■□□□□ 0.71
SPHK1-202ENST00000392496 EXOGQ9Y2C4 368 aaKnown RBP19.47■□□□□ 0.71
SPHK1-202ENST00000392496 EXOSC1Q9Y3B2 195 aaKnown RBP19.47■□□□□ 0.71
SPHK1-202ENST00000392496 OTOGLQ3ZCN5 2332 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 RIIAD1A6NNX1 92 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 CSO75390 466 aaKnown RBP19.46■□□□□ 0.71
SPHK1-202ENST00000392496 PPP1R3DO95685 299 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 ZNF182P17025 639 aaPredicted RBP19.46■□□□□ 0.71
SPHK1-202ENST00000392496 HK1P19367 917 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 RGS6P49758 472 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 FBXW4P57775 412 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 INSM1Q01101 510 aaPredicted RBP19.46■□□□□ 0.71
SPHK1-202ENST00000392496 KIF26BQ2KJY2 2108 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 SLC35F1Q5T1Q4 408 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 ARHGAP11AQ6P4F7 1023 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 BBS1Q8NFJ9 593 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 B4GALNT2Q8NHY0 566 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 RNF138Q8WVD3 245 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 CDC6Q99741 560 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 ZNF700Q9H0M5 742 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 MYOTQ9UBF9 498 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 FRYLO94915 3013 aa19.46■□□□□ 0.71
SPHK1-202ENST00000392496 TEX51A0A1B0GUA7 166 aa19.45■□□□□ 0.7
SPHK1-202ENST00000392496 MYL12BO14950 172 aa19.45■□□□□ 0.7
SPHK1-202ENST00000392496 HSMCR30P0CW71 290 aa19.45■□□□□ 0.7
SPHK1-202ENST00000392496 GP1BBP13224 206 aa19.45■□□□□ 0.7
SPHK1-202ENST00000392496 MYL12AP19105 171 aa19.45■□□□□ 0.7
SPHK1-202ENST00000392496 TMED10P49755 219 aaKnown RBP19.45■□□□□ 0.7
SPHK1-202ENST00000392496 RPS4XP62701 263 aaKnown RBP19.45■□□□□ 0.7
SPHK1-202ENST00000392496 TMED1Q13445 227 aa19.45■□□□□ 0.7
SPHK1-202ENST00000392496 SPHARQ15513 63 aa19.45■□□□□ 0.7
SPHK1-202ENST00000392496 CDCP2Q5VXM1 449 aa19.45■□□□□ 0.7
SPHK1-202ENST00000392496 PLBD1Q6P4A8 553 aa19.45■□□□□ 0.7
SPHK1-202ENST00000392496 RAB11FIP2Q7L804 512 aa19.45■□□□□ 0.7
SPHK1-202ENST00000392496 LRRC17Q8N6Y2 441 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms